Transcript Information: R_Transcript_136347.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.579583159543
Replicate 21.2113250240172
Replicate 30.88102836908279
Condition 2: 8 Hour
Replicate 12.1189690819731
Replicate 21.7200678339374
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 10.44149629284046
Replicate 20.84827918809913
Replicate 31.4732108923873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_136347.p1 GENE.R_Transcript_136347~~R_Transcript_136347.p1 ORF type:3prime_partial len:104 (+),score=7.97,DUF247|PF03140.11|4.6e-14 R_Transcript_136347:107-415(+)
ATGGCTGATAATGGTGACTTAGAATACCTGCACCAAGTCCCGTCTACCGGTCATGATTCACCGCCGATCGCCGGTGACAGACTTCCAATGGATGACTCAATTGACGAGCTAGCTATTAGCATTAGGAGGAAGTACGAATCATTGCCTCCGTTATCTTCAAAATGTTGTATCTACAGAGTCCCCAGACACCTCAGGATTATAAATGAACAATTCTATACTCCTCGCCTTATCTCCATTGGCCCCTTCCATCGAGGCAATCCAGTGGTTCAGCCCATGGAGGAGCAAAAATTGAGATACCTACAGAGATTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_136347.p1 GENE.R_Transcript_136347~~R_Transcript_136347.p1 ORF type:3prime_partial len:104 (+),score=7.97,DUF247|PF03140.11|4.6e-14 R_Transcript_136347:107-415(+)
MADNGDLEYLHQVPSTGHDSPPIAGDRLPMDDSIDELAISIRRKYESLPPLSSKCCIYRVPRHLRIINEQFYTPRLISIGPFHRGNPVVQPMEEQKLRYLQRF

Click here to download the sequence:
Link to NCBI Protein BLAST