Transcript Information: R_Transcript_13645.p1


Annotated TAIR IDAT1G76280.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28617948-28622581 | Reverse length=801
E-Value2.1E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3312110740011
Replicate 22.5927634896639
Replicate 33.2723910851646
Condition 2: 8 Hour
Replicate 12.7272391950927
Replicate 22.6529859811576
Replicate 34.8125940991099
Condition 3: 24 Hour
Replicate 15.419821318889
Replicate 23.5245692173804
Replicate 35.0347020466229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13645.p1 GENE.R_Transcript_13645~~R_Transcript_13645.p1 ORF type:complete len:826 (+),score=147.91,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|0.0004,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|27,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1e+04,PPR|PF01535.16|0.031,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00045,PPR|PF01535.16|17,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|5.3e+02,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|7.7e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|10,PPR_1|PF12854.3|3.8e+02 R_Transcript_13645:497-2974(+)
ATGCATAGGACTATATTAAAATGCCATTGGAGAACTGTTCGAGGGTTTGTTTTTGGATCTGTGTTGCCGAAAAGGGGAAACATAATTGGACCTCACCTGGTGGAATCATTTCAAACTATTGCTGGCTCTACAGATCCTGTGAGTTTCAGCTACAGAGGAGAATTGGTTACCTTGGGTGTTCAAATTGTTCATGCTCTGCAGTTAGGTCATAGAAGCCGAGCATCTAGTCTACTTACGGAACTTGATGCTGCAAATCATGCAGTACAGATTGCAGATATCATCCGCATTCTTGACTACTGTGCTAGGTCTCCTGATCCATTGTTTGTGATGGAGACTTGGAGAGTCCTGGAACAAAAAAATATTCATTTGAATCATAAATGCTACATGCTTATGATTCGTGCACTTTGCAATGGTGGTTACATGGAGGAGGCAGTCCAGTTGGTGAAATTTCTTGGAGAACATCAACAAATCAGTTATATCCTACCTCTGTACAATTGTTTTCTGTCAGCCTGTACAAAAATGAAAGATACAATGCATTTTCATCAGTGCTTAGATTTGATGGAGAATGAATTATTGGGGAAAAATGAAGTAACATATGCAGTACTTCTCAAGCTTGCAGTTTGGCAGAAGAATCTGTCTGCAGTGCATGAAATCTGGAGAGAGTATAGCAAGTATTACAACTTGAACATTATTTCTTTGCGGAAGTTCATATGGTCTTTTACACGGTTGAAGGATCTGGAATCTGCATATAACACATTACAGTATCTGGTAGCTTTGGCTTTTAAAGAAGGCCCCCTTTTGTATAAAACTATGGAGGGGAAGATCTGCTGCCCACATCTGGACATTCCTATTCCATCACATCGGATGACTGTCATGGGATCTCATCTGTTCTATGGTCATGCCAGCCCAATGCTGAACAATGATGAAACAATGACAATGAACTCGAGTATGGCCCTGAATTGTCCTTTCAACGCAGAGGGTAACATAAGCAGGATCACTAGAAACACGCTTGAGGAGCATAAAGAGAGGTCTATCATGAAGTTGTTGAGGTGGTCTTTTAATGATGTCATACATGCATGTGCCCAATGTCGAAATAGTGAGCTAGCTGAACAATTGGTCATGCAGATGCGAAATCTTGGACTGGAACCATCATCCCATACATTTGACGGTTTGATCAGAGCAGTTATTCCAGGCAGAGGAATTAGCGACACCATAGATATGTTAAAAGTGATGCACGGGAGAAAGTTGGAACCATATGATTCCACTCTTTCAACCCTTTCAGTAGGCTGTAGCAGAGCCTTGGACTTGGATTTAGCTGAAGCTTTGCTCAACCGGATTGCACAAGTTCCTCATGCTCATCCTTTTAATGCATTTTTTGCAGCATGTGATACTATGGAACAACCTGAACGTGCTATCAAGATGTTGGCCAGGATGAGACAGTTGAATATCAAGCCAGATGCCAGGACGTATGCGCTGTTATTTTCTTTGTTTGGGAATGTCAATGCCCCCTATGAAGAAGGTAATTTATTCTCACAGGCAGAGGTTTCTAAAAGGATCGAGGTCATAGAAATGGATATGCTCAATAATGGAATTCAGCACAGTCATCTGTCAATAAAGAGCTTGTTGAAAGCCCTTGGGACAGAAGGGATGGTGCAGGAGCTGGTAAAATACATGCATGCAACAGAAAAACAGTTCTCCGACCACAACTTCATCGGAACTGATATCTACAATACAGTTCTGCATTCACTTGTTGAGGCTAAAGAGAATCATGTGGCAATTCAAATGTTCAGGAACATGAAACTTTGTGGGCTTCAGCCTGATGCTGCAACTTACAATATCATGATTGATGGATGTTCAAACATAAGATGTTTCAAGTCTGCTTGTGCTTTGGTTTCTATGATGTTGCGCGATGGCTTCCATCCTAAGACATTAACATATACTGCACTTATTAAGATTCTGCTGGATGATGATGCATTTGATGACGCTTTGAATCTTCTTGACCAAGCTATCTTTGAAGGCAATGAACCTGATGTACTATTGTTCAATACGGTTCTTCGCAGAGCAGGTTTACAGGGAAGGTTCGATATTGTTGAGCTTGTGGTTGAGCTGATGGATCAAGAGAAAATCCAGCCAGATCCATCAACCTGTAGCTATGTATTCAATGCATATGTTGATCATCGATTCTTTGAAACTGCCGTTGAAGCCCTGCAAGTCTTGAGCATGAGAATGATCTCTAAAGATTGTGATACTCTTGAGGATGTGAGAAGGGAGTTTGAGGATCTCATTCTTGCTGATGAAACAGAAGCTGAGAAACAGATAATGCGGATTTTCAAACAGTCTGAGAACCTTGCTGCTGCTCTTCTTAATCTAAGATGGTGTTCTATAGCTGGATACTCAGTTTCATGGGTGTCCGATCAGAGTCCATGGGCAAAAAGGCTTGCTAGCTCTTCTGATACGGAAATGGCATATACCCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13645.p1 GENE.R_Transcript_13645~~R_Transcript_13645.p1 ORF type:complete len:826 (+),score=147.91,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.4e-05,PPR_2|PF13041.2|0.0004,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|27,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1e+04,PPR|PF01535.16|0.031,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00045,PPR|PF01535.16|17,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|5.3e+02,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|7.7e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|10,PPR_1|PF12854.3|3.8e+02 R_Transcript_13645:497-2974(+)
MHRTILKCHWRTVRGFVFGSVLPKRGNIIGPHLVESFQTIAGSTDPVSFSYRGELVTLGVQIVHALQLGHRSRASSLLTELDAANHAVQIADIIRILDYCARSPDPLFVMETWRVLEQKNIHLNHKCYMLMIRALCNGGYMEEAVQLVKFLGEHQQISYILPLYNCFLSACTKMKDTMHFHQCLDLMENELLGKNEVTYAVLLKLAVWQKNLSAVHEIWREYSKYYNLNIISLRKFIWSFTRLKDLESAYNTLQYLVALAFKEGPLLYKTMEGKICCPHLDIPIPSHRMTVMGSHLFYGHASPMLNNDETMTMNSSMALNCPFNAEGNISRITRNTLEEHKERSIMKLLRWSFNDVIHACAQCRNSELAEQLVMQMRNLGLEPSSHTFDGLIRAVIPGRGISDTIDMLKVMHGRKLEPYDSTLSTLSVGCSRALDLDLAEALLNRIAQVPHAHPFNAFFAACDTMEQPERAIKMLARMRQLNIKPDARTYALLFSLFGNVNAPYEEGNLFSQAEVSKRIEVIEMDMLNNGIQHSHLSIKSLLKALGTEGMVQELVKYMHATEKQFSDHNFIGTDIYNTVLHSLVEAKENHVAIQMFRNMKLCGLQPDAATYNIMIDGCSNIRCFKSACALVSMMLRDGFHPKTLTYTALIKILLDDDAFDDALNLLDQAIFEGNEPDVLLFNTVLRRAGLQGRFDIVELVVELMDQEKIQPDPSTCSYVFNAYVDHRFFETAVEALQVLSMRMISKDCDTLEDVRREFEDLILADETEAEKQIMRIFKQSENLAAALLNLRWCSIAGYSVSWVSDQSPWAKRLASSSDTEMAYTH*

Click here to download the sequence:
Link to NCBI Protein BLAST