Transcript Information: R_Transcript_13654.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value9.5E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.858531807857
Replicate 212.776969455558
Replicate 317.084431379691
Condition 2: 8 Hour
Replicate 117.535331854613
Replicate 224.891519674789
Replicate 332.666163825186
Condition 3: 24 Hour
Replicate 119.848493818386
Replicate 215.017217092471
Replicate 325.989111316539


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13654.p1 GENE.R_Transcript_13654~~R_Transcript_13654.p1 ORF type:complete len:539 (+),score=78.38,GRAS|PF03514.10|2.4e-135 R_Transcript_13654:452-2068(+)
ATGTCGAATGGTTTGTATTTTGAGCCTAACAGAGAAATTGAGGCGTATTTTATGCCTCAATGTCAAACACTAAACCCTCAGCCTTGCTATACCGACCTCAGCCATGAAAGCTACATGTCCTCAAAAGTTTTCCCAGGACAGTACTGCACCCTAGAATCGTCCTCGGGGATTGGGAGCTATCCAGTACACTGCACCACATCAACTCTCAGCTTCTCATCCAACACAAGTCCTGGATCGCAGCTCGATTCCAATTCATACCCGCCCGATCAACACTGCTCCCCTGATAATGCCACAAATTCACCTGTGAGTAACTCTTGTATCACGGATGATCAATGTGACCTGAAGTACAAGCTGAGAGAGTTGGAAACTGTGATGCTCGGACCTGATGTTGATATTATAGATGGCTATGGCAAAGCATTTGAGAGCGGATTCGAGTTAACCTCGCTGGAGATGGACAGCTGGGGAAAAGTGATGGAGATGATTGCTCGTAAGGACTTGAAACAGGTCCTTCTTGCCTGTGCACAAGCAGTAGCCGAAAATGATCAATTAGTAGCCCAGTGGTTGATGGATGAATTGCGGCAGCTGGTGTCAGTTTCAGGGGAGCCAGTTCAAAGATTGGGCGCATACATGTTAGAAGGGCTTGTAGCAAGGCAGGCTTCCTCAGGTAGCTCCATTTACAAAGCCTTAAAGAGCAAAGAGCCTGCTAGTGCTGATCTTTTATCTTATATGCACATCCTTTTTGAGGTTTGTCCATACATTAAGTTTGGTTACATGTCTGCAAATGGTGCAATTGCTGAAGCAATGAAGGACGAAAAAAGAGTCCACATTATCGATTTCCAAATTGGGCAGGGAAGTCAGTGGGTTACCCTAATCCAAGCATTTGCAGCCCGGCCTGGTGGGCCACCCCACATCCGTATAACTGGGATTGACGACTCCTATTCTGCATACGCCCGTGGAGGAGGGCTAAATATTGTTGGTCAAAGGCTTTCAAGGTTGGCTCGGTCATTCAAGGTTCCGTTTGAGTTTCATGCTGTTGACAGGTCTGGTTGTCAAGTGCAGTTCAAAGATCTCGGTGTTCAATGCGGTGAGGCACTGGCTGTGAATTTTGCTTTCATCCTGCATCACATGCCAGATGAAAGTGTGAGCACCGAGAATCACAGGGATCGACTATTGAGGCTTGTTAAGGGCCTGACCCCGAAAGTGGTGACCCTTGTGGAGCAAGAATGTAACACAAATACTGCTGCTTTCTTGCCTAGGTTTCTTGAGACATTGGATTATTATACAGCAATGTTTGAGTCGATGGATGTGACTTTGCCAAGGGATCATAAAGATCGGATCAACGTTGAGCAACACTGTTTAGCAAGGGATGTTGTTAACTTGATAGCTTGTGAGGGATCCGAGAGGGTGGAGCGCCATGAGCTCCTTGGAAAGTGGAGGTCGCGCTTCACAATGGCAGGATTTAAGCCATACCCTTTGAGCACTTTGGTGAATAACACCATAAAGACACTACTAAAGAACTACTGCGATCGGTATAGACTAGAGGAGAGGGATGGGGCTCTATATCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCCTGGCAATGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13654.p1 GENE.R_Transcript_13654~~R_Transcript_13654.p1 ORF type:complete len:539 (+),score=78.38,GRAS|PF03514.10|2.4e-135 R_Transcript_13654:452-2068(+)
MSNGLYFEPNREIEAYFMPQCQTLNPQPCYTDLSHESYMSSKVFPGQYCTLESSSGIGSYPVHCTTSTLSFSSNTSPGSQLDSNSYPPDQHCSPDNATNSPVSNSCITDDQCDLKYKLRELETVMLGPDVDIIDGYGKAFESGFELTSLEMDSWGKVMEMIARKDLKQVLLACAQAVAENDQLVAQWLMDELRQLVSVSGEPVQRLGAYMLEGLVARQASSGSSIYKALKSKEPASADLLSYMHILFEVCPYIKFGYMSANGAIAEAMKDEKRVHIIDFQIGQGSQWVTLIQAFAARPGGPPHIRITGIDDSYSAYARGGGLNIVGQRLSRLARSFKVPFEFHAVDRSGCQVQFKDLGVQCGEALAVNFAFILHHMPDESVSTENHRDRLLRLVKGLTPKVVTLVEQECNTNTAAFLPRFLETLDYYTAMFESMDVTLPRDHKDRINVEQHCLARDVVNLIACEGSERVERHELLGKWRSRFTMAGFKPYPLSTLVNNTIKTLLKNYCDRYRLEERDGALYLGWMNRDLVASCAWQCS*

Click here to download the sequence:
Link to NCBI Protein BLAST