Transcript Information: R_Transcript_136711.p4


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95440318717484
Replicate 21.0978457734012
Replicate 30.44915171757162
Condition 2: 8 Hour
Replicate 11.2803066639083
Replicate 21.0230468816229
Replicate 30.71182786746616
Condition 3: 24 Hour
Replicate 10.75025513816027
Replicate 20.28830403778532
Replicate 31.5736258271626


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_136711.p4 GENE.R_Transcript_136711~~R_Transcript_136711.p4 ORF type:complete len:153 (+),score=19.13,RVT_1|PF00078.23|3.3e-16 R_Transcript_136711:3050-3508(+)
ATGCTAAAAATGGGGTTTGATACTGGTTGGGTTGCTAATGTTATGAATTGCGTGAGAACAGTCTCATACTCTTTTCTTATCAATGGGGAGCCAAGTGAAATGGACATCCCATCTCGTGGTCTACGCCAAGGGGACCCCATATCCCCATATTTATTCTTATTGTGTGCTGAAGGCCTGTCTAGTTTGATTTCTGATGCAGTATCTACAGGCGGGCTCAATGGCCATCGTGTTGCAACAGGGGCACTAGTTATCTCTCATCTCTTATTCGCGGATGACTCAATGTTCTTTACTAGAGCTGAGGAAGATCAAGCGAGGAAGGTCTTGGACATTCTCCAATGGTATGAAGAAGCTTCGGGTCAACAAATTAATAAAGCCAAAACAACTGTCTCATTTAGCAAAGGTGTGACGAATGCGAAGCGGAATACTATTGTGCAACTCCTGGGTGTTCATGAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_136711.p4 GENE.R_Transcript_136711~~R_Transcript_136711.p4 ORF type:complete len:153 (+),score=19.13,RVT_1|PF00078.23|3.3e-16 R_Transcript_136711:3050-3508(+)
MLKMGFDTGWVANVMNCVRTVSYSFLINGEPSEMDIPSRGLRQGDPISPYLFLLCAEGLSSLISDAVSTGGLNGHRVATGALVISHLLFADDSMFFTRAEEDQARKVLDILQWYEEASGQQINKAKTTVSFSKGVTNAKRNTIVQLLGVHEV*

Click here to download the sequence:
Link to NCBI Protein BLAST