Transcript Information: R_Transcript_136891.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value3.7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5007300984238
Replicate 24.4581185815427
Replicate 31.5689546298735
Condition 2: 8 Hour
Replicate 12.0125368449791
Replicate 24.2883882983096
Replicate 33.8541091043287
Condition 3: 24 Hour
Replicate 14.7173576495282
Replicate 22.5680780899987
Replicate 35.0971367079076


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_136891.p1 GENE.R_Transcript_136891~~R_Transcript_136891.p1 ORF type:5prime_partial len:146 (+),score=27.22,Sigma70_r4|PF04545.12|8e-20,Sigma70_r3|PF04539.12|2.9e-05,Sigma70_r3|PF04539.12|3.8e+03,Sigma70_r3|PF04539.12|5.7 R_Transcript_136891:1-438(+)
GGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAGGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTCGAGAAGGTGCTGGATACACTCAGTTCGAGGGAGAAGCAGGTGATAAGATGGAGATTCGGATTAGAAGATGGAAGAATGAAAACGTTACAGGAGATTGGCGAGCTGATGGGCGTCAGCCGGGAAAGAATTAGGCAAATTGAGTCATCTGCCTTCAGGAAGCTGCAAAGTTATTTTTTGGAGGATGTGGATGTGGCATGCTGTTGGAAGAGTTCAGTACAAAGCTCCTATTTTGTGCACTTCTTATCAAAGTGTTGGTATAATTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_136891.p1 GENE.R_Transcript_136891~~R_Transcript_136891.p1 ORF type:5prime_partial len:146 (+),score=27.22,Sigma70_r4|PF04545.12|8e-20,Sigma70_r3|PF04539.12|2.9e-05,Sigma70_r3|PF04539.12|3.8e+03,Sigma70_r3|PF04539.12|5.7 R_Transcript_136891:1-438(+)
GLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQSYFLEDVDVACCWKSSVQSSYFVHFLSKCWYNL*

Click here to download the sequence:
Link to NCBI Protein BLAST