Transcript Information: R_Transcript_136893.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value8E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.366341486526
Replicate 218.516422414373
Replicate 317.495697219109
Condition 2: 8 Hour
Replicate 120.62982322327
Replicate 216.02236415392
Replicate 310.862381158657
Condition 3: 24 Hour
Replicate 112.834679631236
Replicate 211.80911499653
Replicate 312.064089197503


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_136893.p1 GENE.R_Transcript_136893~~R_Transcript_136893.p1 ORF type:5prime_partial len:127 (+),score=26.33,Sigma70_r4|PF04545.12|5.9e-20,Sigma70_r3|PF04539.12|2.2e-05,Sigma70_r3|PF04539.12|3.1e+03,Sigma70_r3|PF04539.12|4.6 R_Transcript_136893:1-381(+)
GGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAGGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTCGAGAAGGTGCTGGATACACTCAGTTCGAGGGAGAAGCAGGTGATAAGATGGAGATTCGGATTAGAAGATGGAAGAATGAAAACGTTACAGGAGATTGGCGAGCTGATGGGCGTCAGCCGGGAAAGAATTAGGCAAATTGAGTCATCTGCCTTCAGGAAGCTGCAAAGTAAGAAGAGAACCCAACATTTGGAACAATACTTGTTCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_136893.p1 GENE.R_Transcript_136893~~R_Transcript_136893.p1 ORF type:5prime_partial len:127 (+),score=26.33,Sigma70_r4|PF04545.12|5.9e-20,Sigma70_r3|PF04539.12|2.2e-05,Sigma70_r3|PF04539.12|3.1e+03,Sigma70_r3|PF04539.12|4.6 R_Transcript_136893:1-381(+)
GLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQSKKRTQHLEQYLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST