Transcript Information: R_Transcript_137004.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64548781372286
Replicate 20.66000158479522
Replicate 30.63004779242855
Condition 2: 8 Hour
Replicate 10.96211650087407
Replicate 21.0982751395474
Replicate 30.784548985557
Condition 3: 24 Hour
Replicate 11.1726974222403
Replicate 20.8666113512997
Replicate 30.98903184243347


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_137004.p1 GENE.R_Transcript_137004~~R_Transcript_137004.p1 ORF type:complete len:509 (+),score=87.62 R_Transcript_137004:151-1527(+)
ATGGCACATATTAGTGGGGAGTTAAATAGAAGAATTATCCGTACGATAGACCTAAGAAGTGACCAATTGATGATATATGGCACTGAGATTAAACAATCTATGTTAGATAAGCTACATCAATCTGTTGTTTTGAGTCAAGAATCTGGTGTTATCTATGTTAATTGTGATGGAGCTTGCTATTTTCTTCTACCAGGGAAAGTTTGTTCTAGGCCAGTCTATAATGCTATAATATTTGATTGGTCTCGTTTCGGAATTCTAGTACCAAATTCCATGAGTGATTCTTTAAGAAAACAGTTGGAGCAATCACGAGGTCAAATACAAGAGTTCAAAGAACAAATTTCAGCTTGTCAAAATGAGAAGAAAGAGATGGAGGCGAAATTGAAAGCAGTATGTGATCAACTTTCTTTGGTTGATTTTGCACTGGAAACCAACAAGATTGAGTTAGATTCGTCTAAGAAAGAGGTCAAGAAGCTAAGGGATCAACTTTCTATGTGTAAGAAGGAAACTCGAAACTTGGAAGTTGAGATGCAGAAGGTACGAAATCAACTTTCATCATCTAATTCTGAATTACAATCAGCTATGTCACAATTAGAGCTCTCGAAGAAAAGGGTGATTGCTCTTGAGGAACAACTGTCCATTGTTAAGAAGGAGACTGAAGGTAAAGAAAAGGAATCACAAAGAGTAAAAGATCAACTTTCTTCAGAGTTGAATCTATCAAGGAAGAGGGTAATGGAACTCGAGGAACAAAAAGAAGGCATGGAAATAGACTTAGAGAAGGCAAACAATCAACTTTCTTCAACTAATTTGGAGTTAGAGCGCAACAAGGAGAAAGTGGAGTCATTACTTGCCAGCACGAAAGAGCTCGAGAATCAGCTTAACTCGACTAGGGAGGAAAGCCAACAAGTAGAGAGAGAACTACAAATCCAAATCGAGTTCTCGAAGAAAATGGTGGAAGAGCTTCGAGAGCAACTTTTAACTTGTGAGAAAGAAGGTGAAAGCATGAAAATGGAGCTTCAAAAGGTATGTGATCAACTTTGTTTGGCTAATGATGAATTACAATCCACCAGGAATCAATTAGAGTCATACGAGGAACATGTGCAAGAGCTTGAAAGCCAATCTTGTAAGAGGGAAATTCAACATATGGAAGAAGAATTACAAAAGACATCTAATCATCTATCATCAATTGATTCTGAGGTGAAATCTGCCACTCAAAAATTAGACCAATTATTGATTTCAATGATGTGTTGTGAGCTCGATCGTTGTAACGACTCTCAAGCTAGATCGTGTCAAGTCATTTTGGATACTCAACGGCGAGATACAATATCTGGAGATACAATGAGCAACTTAACACTTCGTATCACAATTGAAGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_137004.p1 GENE.R_Transcript_137004~~R_Transcript_137004.p1 ORF type:complete len:509 (+),score=87.62 R_Transcript_137004:151-1527(+)
MAHISGELNRRIIRTIDLRSDQLMIYGTEIKQSMLDKLHQSVVLSQESGVIYVNCDGACYFLLPGKVCSRPVYNAIIFDWSRFGILVPNSMSDSLRKQLEQSRGQIQEFKEQISACQNEKKEMEAKLKAVCDQLSLVDFALETNKIELDSSKKEVKKLRDQLSMCKKETRNLEVEMQKVRNQLSSSNSELQSAMSQLELSKKRVIALEEQLSIVKKETEGKEKESQRVKDQLSSELNLSRKRVMELEEQKEGMEIDLEKANNQLSSTNLELERNKEKVESLLASTKELENQLNSTREESQQVERELQIQIEFSKKMVEELREQLLTCEKEGESMKMELQKVCDQLCLANDELQSTRNQLESYEEHVQELESQSCKREIQHMEEELQKTSNHLSSIDSEVKSATQKLDQLLISMMCCELDRCNDSQARSCQVILDTQRRDTISGDTMSNLTLRITIEDE*

Click here to download the sequence:
Link to NCBI Protein BLAST