Transcript Information: R_Transcript_137008.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1861129862272
Replicate 20.22739675541117
Replicate 30
Condition 2: 8 Hour
Replicate 10.44198312179143
Replicate 20.8879772572312
Replicate 30.45870496152603
Condition 3: 24 Hour
Replicate 10.58016119347989
Replicate 20.55735311275827
Replicate 30.31606793771693


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_137008.p1 GENE.R_Transcript_137008~~R_Transcript_137008.p1 ORF type:5prime_partial len:277 (+),score=62.02 R_Transcript_137008:2-832(+)
GAAGTTGAGATGCAGAAGGTACGAAATCAACTTTCATCATCTAATTCTGAATTACAATCAGCTATGTCACAATTAGAGCTCTCGAAGAAAAGGGTGATTGCTCTTGAGGAACAACTGTCCATTGTTAAGAAGGAGACTGAAGGTAAAGAAAAGGAATCACAAAGAGTAAAAGATCAACTTTCTTCAGAGTTGAATCTATCAAGGAAGAGGGTAATGGAACTCGAGGAACAACTTTCGACCACTAGGAAGGAAAAAGAAGACATGGAAATAGACTTAGAGAAGGCAAACAATCAACTTTCTTCAACTAATTTTGAGTTAGAGCAGACCAAGGAGCAAGTGGAGACATTACGTGCAAGCATGAAAGAGCTTGAGTATCAGCTTAACTCGACTAGGGAGGAAAGCCAACAAGTAGAGAGAGAACTACAAATCCAAATCGAGTTCTCGAAGAAAATGGTGGAAGAGCTCCGAGAGCAACTTTCAATGGAGCTACAAAAGGTATGTGATCAACTTTGTTTGGCTAATGATGAGTTACAATGGTACGAGAAACATGTGCAAGAGCTTGAAAGCCAATCTTGTAAGAGGGAAATTCAACATATGGAAGAAGAATTACAAAAGACATCTAATCATCTATCATCAATTGATTCTGAGGTGAAATCTGCCACTCAAAAATTAGACCAATTATTGATTTCAATGATGTGGAGTGAGCTCGATCGTTGTAACAACCCTCAAGCTAGATCGCGTCAAGTCATTTTGGATACTCAACCGCGAGACACAATATCTGGAGATACAATCAGCAACTTAACACTTTGTATCACAATTGAAGATGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_137008.p1 GENE.R_Transcript_137008~~R_Transcript_137008.p1 ORF type:5prime_partial len:277 (+),score=62.02 R_Transcript_137008:2-832(+)
EVEMQKVRNQLSSSNSELQSAMSQLELSKKRVIALEEQLSIVKKETEGKEKESQRVKDQLSSELNLSRKRVMELEEQLSTTRKEKEDMEIDLEKANNQLSSTNFELEQTKEQVETLRASMKELEYQLNSTREESQQVERELQIQIEFSKKMVEELREQLSMELQKVCDQLCLANDELQWYEKHVQELESQSCKREIQHMEEELQKTSNHLSSIDSEVKSATQKLDQLLISMMWSELDRCNNPQARSRQVILDTQPRDTISGDTISNLTLCITIEDE*

Click here to download the sequence:
Link to NCBI Protein BLAST