Transcript Information: R_Transcript_137175.p1


Annotated TAIR IDAT5G56980.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23056574-23057713 | Reverse length=379
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7219327739493
Replicate 23.131027255062
Replicate 34.0187258940618
Condition 2: 8 Hour
Replicate 13.0070360461529
Replicate 22.3537770359143
Replicate 33.0252684367312
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 24.836679581267
Replicate 34.2239430097521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_137175.p1 GENE.R_Transcript_137175~~R_Transcript_137175.p1 ORF type:5prime_partial len:114 (+),score=4.82,DUF761|PF05553.7|2.8e-15 R_Transcript_137175:2-343(+)
ACGGTGGCGAAAGGCGGTGGTGGGACGGCGTCGTTTGGTGGTTATAATAAGAGTCTTGAAGAGGATCAGGTGGATACAAAGGCAGATGATTTCATAAACAAGTTCAAGCAGCAGCTCAAGATGCAACGCCTTGAATCCTTGCTGCGTTACAGGAATCCTTGCTGCGTTACAGGAATCCTTGCTGCGTTACAGGAATACTGCCACGTCATCTTCCTAAAACGCACTGTTTTTGGATTCAGTTTCATCTTTTATTTTCTTAGAGATTTATTTACTACCACTAGGTATCAGTTAAATTTTTTTCTTAGGAAAAATACTTTGTCTAAATTAATTAGACTAAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_137175.p1 GENE.R_Transcript_137175~~R_Transcript_137175.p1 ORF type:5prime_partial len:114 (+),score=4.82,DUF761|PF05553.7|2.8e-15 R_Transcript_137175:2-343(+)
TVAKGGGGTASFGGYNKSLEEDQVDTKADDFINKFKQQLKMQRLESLLRYRNPCCVTGILAALQEYCHVIFLKRTVFGFSFIFYFLRDLFTTTRYQLNFFLRKNTLSKLIRLK*

Click here to download the sequence:
Link to NCBI Protein BLAST