Transcript Information: R_Transcript_137422.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 20.66654921956502
Replicate 30.9695973585673
Condition 2: 8 Hour
Replicate 11.4251032508979
Replicate 20.94649235306606
Replicate 31.1524832139928
Condition 3: 24 Hour
Replicate 10.60734939755831
Replicate 20.81686144039175
Replicate 30.92646369045068


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_137422.p1 GENE.R_Transcript_137422~~R_Transcript_137422.p1 ORF type:internal len:189 (+),score=19.73,zf-RVT|PF13966.2|6.7e-19,zf-RVT|PF13966.2|3.6e+03 R_Transcript_137422:2-565(+)
TGTGCTTCTTTCCTACGCTCCTTGCAAGGTCATACTGGAGGTCCCACCTTTCCCATTGCTCGGCTTCTGTGGAAGGCAAAAGCCCCACTCAAGGTGAGGGCTTTTGTTTGGACCTTGGCTTTAGGAAAGATTAACACCAATGATGTGCGGCAACGTAGGCGACCTCAGTGGAATCTTTCGCCTGATATGTGCCTCATGTGTCATAGGAGTGGGGAGACGGTCTCTCACCTATTTCTTCATTGTTCTGTGGCACGTGCTGTGTGGGCTATGCTCTTTGACATGCGGGGGGAAGCTTTTGTTTGTCCATCCACTGTTTTGGAGTTCCTGGAGGTCTGCTTTTGGGGATTTGGTAGGGATAAGGAACTGGGTGTATTATGGCGTAATGCAATTTTTGCTACTCTATGGTGTATATGGTTGGAACGCAATGCAAGAGTGTTTCAACAGGTTGCTCTCCCTACCTCTCTTATGTGGGATCGGATCACCTACTTAGCATCCTTGTGGAGTAAAGCTAGTGGGGCGTTTCGTAGTTATTCTCTATTTGATGTACAACGTAATTGGTCATGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_137422.p1 GENE.R_Transcript_137422~~R_Transcript_137422.p1 ORF type:internal len:189 (+),score=19.73,zf-RVT|PF13966.2|6.7e-19,zf-RVT|PF13966.2|3.6e+03 R_Transcript_137422:2-565(+)
CASFLRSLQGHTGGPTFPIARLLWKAKAPLKVRAFVWTLALGKINTNDVRQRRRPQWNLSPDMCLMCHRSGETVSHLFLHCSVARAVWAMLFDMRGEAFVCPSTVLEFLEVCFWGFGRDKELGVLWRNAIFATLWCIWLERNARVFQQVALPTSLMWDRITYLASLWSKASGAFRSYSLFDVQRNWSC

Click here to download the sequence:
Link to NCBI Protein BLAST