Transcript Information: R_Transcript_138154.p1


Annotated TAIR IDAT4G37380.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17572040-17573938 | Reverse length=632
E-Value4.3E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7451890567991
Replicate 20.78982948274475
Replicate 31.4361590969375
Condition 2: 8 Hour
Replicate 11.074614762575
Replicate 21.0164037200539
Replicate 31.6785972203806
Condition 3: 24 Hour
Replicate 12.015105336601
Replicate 21.7630379363941
Replicate 32.0240980823306


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138154.p1 GENE.R_Transcript_138154~~R_Transcript_138154.p1 ORF type:complete len:638 (+),score=119.70,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|3.3e-12,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|3.1e+02,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|29,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0067,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|0.21,PPR|PF01535.16|0.0066,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|3.6,DYW_deaminase|PF14432.2|6.8e-40,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|7.2e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|84,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.078,PPR_1|PF12854.3|40,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.7e+02,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|2.6e+03 R_Transcript_138154:119-2032(+)
ATGTCTTCAACACCCAGTCCCCTTTTCACATCTCAATCCCTGCCACCAAAATCACCACCACCGCCCACTAACCACCCTGCTTCTCTCTCTATTCCTTCAAACCACCGTCCATCACCAGAAAGACTCGCATTTCTATTAGACAAATGCAAGAACTTAACCCACTTACTCCAAATTCACGCCCTTGTTCTCCGTCAAGGTCACGAAAACAACCCCATCTTGAATTTCAAGCTCCAAAAATCCTACTCTTCTCTTGGCCACCTTGACCGCTCTGTCTCTCTCTTCCACCTCACTGATAACCCAAATGTATTCTTATTCACTGACCTCATTAATGCTCACTCTGCTCGTGGGCTTCGCCACCAAGCTCTTTGTTTTTATGTTCAGATGTTGAGCCAAGGCGTTGAACCAAATGCCTTCACTTTGTCTTCCTTGTTTAAATGTTGTTCTATTCATGATGGGGTTTTGCTCCATTCGCAGGCGATTAAGTTGGGTTTTGATGGGGATTTATTTGTGAGAACTGGGTTGTTGGACCTCTATGCGAAAGGTGGGAATGTGGTCGCTGCACGCCAATTGTTCGACACAATGCCTGAGAGAAGTTTGGTCTCTTTGACTGCAATGTTGACTTGCTATGCTAAACATGGGGGTGTTGATGATGCGAGGGTTTTGTTTGATGGGATTGAAGAGAAGGATGTGGTGTGCTGGAATGCGATGATTGATGGGTATACTCAGCATGGTCGGCCTAATGATGCATTGGATCTTTTTCGGAGAATGCTGAAGGTGAAAGTGAAGCCCACTGAAGTTACTATACTGTCCGTTTTATCTGCGTGTGGGCAGCTTGGTTCGCTTGAGTTAGGGAGGTGGATTCATTCTTACATTGTAAATAATGGGATTCGAGTTAATGTCCATGTTGGCACTGCTCTGGTTGATATGTATGGTAAATGTGGTAGCTTGGAGGATGCTAGGCTTGTTTTCGACAACATTAACAGCAAAGATGTTGTTGCTTGGAATTCGATGATAGTTAGTTATGCAATGCACGGATTCAGCCAGCAGGCTTTGCAGTTGTTTGACAAGATGTGTAGGATGAGACTTCGTCCCAGTGATATCACTTTCATTGGAGTCTTGAATGCCTGTGCTCATGCAGGTTTGGTTTCCAAAGGGAAGGAATTTTTCTTTTTGATGAAGGAAACCTATGGTATTGAACCAAAGGTTGAGCATTATGGATGTATGGTAAATCTCCTTGGCCGTGCAGGGCATTTAGAAGAAGCTTACGAGCTTGTCAAGGGCATGATGGTTGATCCCGATCCTGTGCTTTGGGGAACGTTGCTTGGTGCTTGCAGGCTTCATGGTAATATAACAATGGGAGAAGAGATAGCTGAGTTTCTTGTCAGCAAAAATCTTGCAAATGATGGTACTTATGTTCTTCTGTCAAACATGTATGCCTCAGCAGGCAACTGGGATGGTGTGGCCAACGTGAGAGCCATGATGAAAGCCAGGGGGATAGAAAAGGAGCCGGGTTGTAGCTCCATTGAGGTGAATAACAAGATACATGAGTTCCTTGCTGGGGATATGAGACACCCAAAGAGCACAGAAATCTATATGATGCTAGAGGACATTAATAAGTTGCTGAAAGCTCATGGTTACTCACCACAGACAGATACTGTATTACATGATGTTGGAGAAAGGGAGAAAGAGCTGTCTTTGGGAGTTCACAGTGAGAGACTTGCCATCGCCTTTGGGCTCATCAGCACTTCTCCAGGAACTACAATCAAGATCGTGAAGAACCTACGTGTATGTTCAGACTGTCACACTGTTACAAAGCTGATCTCAAAGATTACAGGACGAAGGATTGTCGTCAGAGATAGAAATCGGTTCCACCACTTCGAAAATGGCAAGTGCTCATGTGGGGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138154.p1 GENE.R_Transcript_138154~~R_Transcript_138154.p1 ORF type:complete len:638 (+),score=119.70,PPR_2|PF13041.2|1.7e-07,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.77,PPR_2|PF13041.2|3.3e-12,PPR_2|PF13041.2|30,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|3.1e+02,PPR|PF01535.16|5.3e+02,PPR|PF01535.16|29,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0067,PPR|PF01535.16|1.3e-08,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|0.34,PPR|PF01535.16|7.1e-06,PPR|PF01535.16|0.21,PPR|PF01535.16|0.0066,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|3.6,DYW_deaminase|PF14432.2|6.8e-40,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|7.2e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|84,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.078,PPR_1|PF12854.3|40,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.7e+02,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|2.6e+03 R_Transcript_138154:119-2032(+)
MSSTPSPLFTSQSLPPKSPPPPTNHPASLSIPSNHRPSPERLAFLLDKCKNLTHLLQIHALVLRQGHENNPILNFKLQKSYSSLGHLDRSVSLFHLTDNPNVFLFTDLINAHSARGLRHQALCFYVQMLSQGVEPNAFTLSSLFKCCSIHDGVLLHSQAIKLGFDGDLFVRTGLLDLYAKGGNVVAARQLFDTMPERSLVSLTAMLTCYAKHGGVDDARVLFDGIEEKDVVCWNAMIDGYTQHGRPNDALDLFRRMLKVKVKPTEVTILSVLSACGQLGSLELGRWIHSYIVNNGIRVNVHVGTALVDMYGKCGSLEDARLVFDNINSKDVVAWNSMIVSYAMHGFSQQALQLFDKMCRMRLRPSDITFIGVLNACAHAGLVSKGKEFFFLMKETYGIEPKVEHYGCMVNLLGRAGHLEEAYELVKGMMVDPDPVLWGTLLGACRLHGNITMGEEIAEFLVSKNLANDGTYVLLSNMYASAGNWDGVANVRAMMKARGIEKEPGCSSIEVNNKIHEFLAGDMRHPKSTEIYMMLEDINKLLKAHGYSPQTDTVLHDVGEREKELSLGVHSERLAIAFGLISTSPGTTIKIVKNLRVCSDCHTVTKLISKITGRRIVVRDRNRFHHFENGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST