Transcript Information: R_Transcript_138207.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeOrtholog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value1.5E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41017889785885
Replicate 20.6291026341962
Replicate 30
Condition 2: 8 Hour
Replicate 10.18341471870596
Replicate 20.41874310564018
Replicate 30.067983560375981
Condition 3: 24 Hour
Replicate 10.085984296732974
Replicate 20.33041586352925
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138207.p1 GENE.R_Transcript_138207~~R_Transcript_138207.p1 ORF type:complete len:267 (+),score=-5.44,Chloroa_b-bind|PF00504.17|1.4e-46 R_Transcript_138207:77-802(+)
ATGGCGACGAGCGGGCTGAGGAGCTGCAGCGCGGTGGGCGTGCCGAGCCTGCTGGCGCCGTCGTCGAACAGGAGCCGCCTGCCGGTCTGCGCCTACGCCACCACCTCCGGGCGCGTCACCATGTCCGCCGAGTGGATGCCGGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCTCCCGGTGACTTCGGGTTCGACCCGCTGGGCCTCGCCACCGTGCCGGAGAATTTCGAGCGGTTCAAGGAGTCGGAGGTGTACCACTGCCGGTGGGCCATGCTCGCTGTGCCTGGGGTGTTGGTGCCGGAGGCGCTGGGGCTGGGCAACTGGGTGCAGGCGCAGGAGTGGGCGGCGGAGCCCGGCGGCCAGGCCACGTACCTCGGCAACCCGGTGCCATGGGGCACGCTGCCGACGATCCTGGTCATCGAGTTCGTCGCCATCGCCTTCGCCGAGCACCAGCGCACCATGGAGAAGGACCCCGAGAAGAAGAAGTACCCCGGCGGCGCCTTCGACCCCCTCGGCTTCTCCAAGGACCCCGTCAAGTTCGAGGAGTACAAGCTCAAGGAGATCAAGAACGGACGATTGGCCATGCTGGCTTTTGTGGGTTTCTGCGTCCAACAGTCGGCGTACCCGGGCACCGGCCCACTGGAGAACCTGGCCAGCCACCTCTCGGACCCGTGGCACAACAACATCGGCGACATCATCATCCCGAGAACCATCTACCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138207.p1 GENE.R_Transcript_138207~~R_Transcript_138207.p1 ORF type:complete len:267 (+),score=-5.44,Chloroa_b-bind|PF00504.17|1.4e-46 R_Transcript_138207:77-802(+)
MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLSDPWHNNIGDIIIPRTIYP*

Click here to download the sequence:
Link to NCBI Protein BLAST