Transcript Information: R_Transcript_138238.p1


Annotated TAIR IDAT2G25920.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K Homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11054425-11055916 | Reverse length=280
E-Value1.6E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9254021623844
Replicate 23.9159766649445
Replicate 34.9994863801126
Condition 2: 8 Hour
Replicate 14.7611404064088
Replicate 23.2831453496979
Replicate 35.618355668215
Condition 3: 24 Hour
Replicate 15.0106325298561
Replicate 24.1134808248299
Replicate 36.2536299105421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138238.p1 GENE.R_Transcript_138238~~R_Transcript_138238.p1 ORF type:complete len:252 (+),score=54.80 R_Transcript_138238:504-1259(+)
ATGGGGTCAGAGACAAATTCACCAACGCCATCTCCAAGTGGGAAGAGAAACAGAGATCCTGAAGATGAAGTTTATGTTGATAATCTTCACTCCCATAAGCGCTACCTCAGTGAGATGATGGCATCGAGTTTGAATGGATTAACTGTGGGAGACCCAATTCCGGAAACTATCATGGATTCTCCAGCTAGGTCAGACAGCATGTTTTATCTGAGAGATGAGGTTGCGCTGCAGTATTCACCAATGTCAGAGGACTTGGATGATTCACGCTACTGTGAAACTCCTATGAGTGCTTGTTCATCCCAATCTGAAAGCCGACCTACTAGTCCTGTCTCTCCGTACAGATATAAACCTGGCAGTGGATTCTGTTCTAGTCCTCCCAGCACACAACAGCCTCCGAATGGATGTACTGTCCTCCCTGCTTCTTCACAACCTCGTCAAAGAGGGTCTGATAATGAAGGCAGATTCCCATCTTCTCCGAGTGATATATGCCACTCAGGGGACTTGAGGAAAGCAGCACTATTACGGTCTGTACAGATGAGATCTCAGCCTTCAGGCACACCAACTTTTGATTCCCTTACTCCTTGTCAAGATCCAATGCAGAATGTTGAACCTGAACCACGATCCTGTTCATTTATGAAACCTTTGGACGACGAACGTGAATACCATATTGACAGATGTTCCGTCATGGGTTCTCCGGAGCCTGAATTTGATCAAGGAAAGTCTTGCATGGCAGTACATTTGAGCAAGGAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138238.p1 GENE.R_Transcript_138238~~R_Transcript_138238.p1 ORF type:complete len:252 (+),score=54.80 R_Transcript_138238:504-1259(+)
MGSETNSPTPSPSGKRNRDPEDEVYVDNLHSHKRYLSEMMASSLNGLTVGDPIPETIMDSPARSDSMFYLRDEVALQYSPMSEDLDDSRYCETPMSACSSQSESRPTSPVSPYRYKPGSGFCSSPPSTQQPPNGCTVLPASSQPRQRGSDNEGRFPSSPSDICHSGDLRKAALLRSVQMRSQPSGTPTFDSLTPCQDPMQNVEPEPRSCSFMKPLDDEREYHIDRCSVMGSPEPEFDQGKSCMAVHLSKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST