Transcript Information: R_Transcript_138267.p1


Annotated TAIR IDAT3G16090.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5456513-5458694 | Forward length=492
E-Value9E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.580791994934
Replicate 218.467548906306
Replicate 321.861722194868
Condition 2: 8 Hour
Replicate 115.862193533343
Replicate 218.076406305922
Replicate 320.569617144636
Condition 3: 24 Hour
Replicate 122.371293904369
Replicate 221.089335143545
Replicate 323.205759896145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138267.p1 GENE.R_Transcript_138267~~R_Transcript_138267.p1 ORF type:complete len:548 (+),score=103.15,zf-RING_2|PF13639.2|1e-11,zf-rbx1|PF12678.3|5.5e-09,zf-C3HC4|PF00097.21|1.2e-07,zf-C3HC4_2|PF13923.2|4.3e-06,zf-C3HC4_3|PF13920.2|5.5e-06,zf-RING_UBOX|PF13445.2|2.4e-05 R_Transcript_138267:289-1932(+)
ATGGTGAGGCTGCGGCCATATGCAGGCCTTAGTTTGTTTGCAACTCTTGCTGTTATTTATCATGCATTTCACAGTAGAGGGCAGTTTTACCCTGCTATGGTCCATCTATCAACTTCCAAGATAAGTTTGGTGATTCTTCTCAACATGGGTCTGGTCATAATGTGTTCTTTATGGCAATTAGCTAAGAAGGTGTTCCTTGGTCCGCTCCGTGAAGCAGAGGTAGAGAGACTGAACGAACAGTCATGGAGAGAGGTCATGGAGATACTATTTGCTATAACTATTTTCCGGCAGGATTTTTCTGTTTCTTTTCTCGCTATGGTTACTGCTCTCCTCTTGATAAAAGCATTGCATTGGTTGGCTCAAAAGAGGGTGGAGTTCATTGAAACAACTCCAGCTGTCCCCATATTGTCCCACATCAGGATTGTCTCTTTTATGGGCTTCCTTCTTCTTTTGGATAGCCTCTTCTTGTACAACTCATTGAAGTATCTGATAGAGACACAACAAGCTTCTGTGTCCATCTTCTTTTCATTTGAGTACATGATACTTGCCACGACAACTGTTGCAATGTTTGTCAAATACATATTTTATGTGAGCGACATGCTTATGGAAGGACAATGGGAGAAGAAGGCTGTCTGTACTTTCTATTTGGAGCTTATCCGTGACTTGCTGCACTTGTCTATGTACCTGTGTTTCTTTATGGTGATTTTCGTGAACTATGGTGTGCCTTTGCATCTGATAAGAGAGCTCTATGAAACATTTCGCAACTTTAAGATCCGCATTGCTGATTATATTCGCTACCGAAAGATCACTTCGAATATGAATGATCGTTTTCCAGATGCAACCCCAGAAGAACTGAATGCAAGTGATGCAACCTGCATCATTTGCCGTGAGGAAATGACCACCGCCAAGAAGCTAAGATGTGGACATCTTTTTCATGTGCACTGCCTTCGGTCCTGGTTGGAACGACAGAATACTTGTCCAACCTGCAGAGCCCTTGTCATACCTCCTGAAACCGGAACTTCTACTGCTGGAGGGCAACATGGGATGCAACCTGGTGTTTATCAACCTGCTTCTGCTAGCACATCTAGCCCTGGCCAAAGTTCAGCTAGTGGTACAGTGGCAAATCCTACTTTGGACAGTAATCAGGCAAGAATTCAGGCAGCAGCTGCAGCTGCTGCAGTGTACCAGAAGTCCTTTGTCTATCCTTGTGCAAACACATTGGTATGGTGCCCTGGATATGCTGCACTACCACAGGTTTATGGAACGTTGCCTGGTTCATCTAATGCAGATTCTGGTGAGATATTAGGTTCAGCAGAACAACTGCAGCGTCAACAACTTGGATTGTCTAGTGGGCAAATGAGTTTGTCTTTGGGTCAGTTGCCTCCTTATTCTTTTGCGCCTATCCAAGCACCTGGGCCAGATATGATGCCTGCCGGAAGCAGTAATCTTTCAACTGACTCGCTGAGAAACTTTCTTGAGCATCAAATTCAGGTCCTACAAACTCAACTCGAGTACTTACGGAAACAACAGCAGGAAAAAACTGCCAGCACGAGTGTTTCAGCATCAACCGATAGCAATGACCAGAACACCAAGTCAACTTCAGACTCCAATTCTTCGGCAGAAAATGAGGAAGCCAACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138267.p1 GENE.R_Transcript_138267~~R_Transcript_138267.p1 ORF type:complete len:548 (+),score=103.15,zf-RING_2|PF13639.2|1e-11,zf-rbx1|PF12678.3|5.5e-09,zf-C3HC4|PF00097.21|1.2e-07,zf-C3HC4_2|PF13923.2|4.3e-06,zf-C3HC4_3|PF13920.2|5.5e-06,zf-RING_UBOX|PF13445.2|2.4e-05 R_Transcript_138267:289-1932(+)
MVRLRPYAGLSLFATLAVIYHAFHSRGQFYPAMVHLSTSKISLVILLNMGLVIMCSLWQLAKKVFLGPLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLAQKRVEFIETTPAVPILSHIRIVSFMGFLLLLDSLFLYNSLKYLIETQQASVSIFFSFEYMILATTTVAMFVKYIFYVSDMLMEGQWEKKAVCTFYLELIRDLLHLSMYLCFFMVIFVNYGVPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLRCGHLFHVHCLRSWLERQNTCPTCRALVIPPETGTSTAGGQHGMQPGVYQPASASTSSPGQSSASGTVANPTLDSNQARIQAAAAAAAVYQKSFVYPCANTLVWCPGYAALPQVYGTLPGSSNADSGEILGSAEQLQRQQLGLSSGQMSLSLGQLPPYSFAPIQAPGPDMMPAGSSNLSTDSLRNFLEHQIQVLQTQLEYLRKQQQEKTASTSVSASTDSNDQNTKSTSDSNSSAENEEANS*

Click here to download the sequence:
Link to NCBI Protein BLAST