Transcript Information: R_Transcript_138420.p1


Annotated TAIR IDAT5G42890.1
Annotated Gene Namesterol carrier protein 2
Annotated Gene Symbol(s)ATSCP2, SCP2
Annotation TypeOrtholog
Chromosome Positionchr5:17194458-17195910 | Reverse length=123
E-Value2.2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.876701530017
Replicate 283.152015140736
Replicate 383.264173166967
Condition 2: 8 Hour
Replicate 191.53049515994
Replicate 2118.72563453772
Replicate 3100.69822082262
Condition 3: 24 Hour
Replicate 1108.04745782562
Replicate 294.697579839701
Replicate 3108.39625178273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138420.p1 GENE.R_Transcript_138420~~R_Transcript_138420.p1 ORF type:complete len:126 (+),score=36.09,SCP2|PF02036.13|2.6e-18 R_Transcript_138420:225-602(+)
ATGGGGGACTCAAATCAGCAACTAAAGTCAGATGCTTTGTTAGAGCAAATGAAAACCCATCTCACCACTGATGCTGGCAAGGAAATCACCAAGAAGATCAATCTTGTTTATCAGCTCCAAATTGCCCCCAAGAAAATTGGGTTTAATGAGGTGATCTATACTGTTGATCTTAAGAAGGGAGAAGTTAAGAAAGGGGCGTATGAAGGGGGGAAGCCAGATGCTACGTTTTCATTCAAGGATGAAGATTTTTACAAAATTGCAACTGGGAAGATGAACCCACAAATTGCTTTCATGAGGGGTGCTATGAAGGTTAAGGGGAGCTTAAGTGCTGCTCAGAAATTTACTCCTGATATTTTCCCTAAGCCTTCTAAAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138420.p1 GENE.R_Transcript_138420~~R_Transcript_138420.p1 ORF type:complete len:126 (+),score=36.09,SCP2|PF02036.13|2.6e-18 R_Transcript_138420:225-602(+)
MGDSNQQLKSDALLEQMKTHLTTDAGKEITKKINLVYQLQIAPKKIGFNEVIYTVDLKKGEVKKGAYEGGKPDATFSFKDEDFYKIATGKMNPQIAFMRGAMKVKGSLSAAQKFTPDIFPKPSKM*

Click here to download the sequence:
Link to NCBI Protein BLAST