Transcript Information: R_Transcript_138520.p1


Annotated TAIR IDAT1G21540.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7548758-7550521 | Reverse length=550
E-Value9.8E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4117684027512
Replicate 21.9622710669437
Replicate 32.3548982575484
Condition 2: 8 Hour
Replicate 11.8307188745604
Replicate 21.5673515309242
Replicate 32.8839007527718
Condition 3: 24 Hour
Replicate 13.3256636638263
Replicate 23.6071685101411
Replicate 32.8638118281922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138520.p1 GENE.R_Transcript_138520~~R_Transcript_138520.p1 ORF type:5prime_partial len:214 (+),score=31.72,AMP-binding|PF00501.24|8.1e-25,AMP-binding_C|PF13193.2|6.5e-24 R_Transcript_138520:1-642(+)
GCAAGGCAGGGCGTGGGGTCCCTGGGGATGACAGAGGTGGATGTTTTAGACCCCAAAACAGGTCAGCCCGTCAAACGAGACGGGCTGACCCCAGGAGAGGTGGTCCTAAGAGGAGGGAGCCTCATGTTGGGGTACTTAAAAGACCCCGAAGCGACCTCCAAAGCCATGACCCCGGCCGGATGGTTCCGAACCGGGGACATGGGGGTCATACATAGTGATGGGTACTTGGAAATCAAAGACAGGCTGAAGGATATAATAATAAGTGGGGGAGAGAATATAAGTAGTGTGGAGGTGGAATCGGTGTTATACAGCCACCCCGCCATCGACGAGGTGGCGGTGGTGGCTCGGCCCCACGAGTATTGGGGAGAGTCTCCTTGTGCCTTTATTAGCCTCAAGAAGGATTGCAATGGTGGTAATATTACTGAGAAGGAGATAATAGAGTTTTGTAGAGACAGAATAGCTCACTTCATGGCTCCTAAGGCAGTTGTTTTCCAAGATGAGCTCCCAAAGACTTCAACTGGTAAAATTCAGAAGTTTCTTTTGAGGGAAATTGCCAAATCCATGGGGCCTCTCAAGGAAAAGGGAAAAATCTCAAGAGCAAATGCAGACAAAGGATGGCCTGTCGCACACACTCAAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138520.p1 GENE.R_Transcript_138520~~R_Transcript_138520.p1 ORF type:5prime_partial len:214 (+),score=31.72,AMP-binding|PF00501.24|8.1e-25,AMP-binding_C|PF13193.2|6.5e-24 R_Transcript_138520:1-642(+)
ARQGVGSLGMTEVDVLDPKTGQPVKRDGLTPGEVVLRGGSLMLGYLKDPEATSKAMTPAGWFRTGDMGVIHSDGYLEIKDRLKDIIISGGENISSVEVESVLYSHPAIDEVAVVARPHEYWGESPCAFISLKKDCNGGNITEKEIIEFCRDRIAHFMAPKAVVFQDELPKTSTGKIQKFLLREIAKSMGPLKEKGKISRANADKGWPVAHTQK*

Click here to download the sequence:
Link to NCBI Protein BLAST