Transcript Information: R_Transcript_138522.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1625542986871
Replicate 28.0871826196591
Replicate 37.8288850012167
Condition 2: 8 Hour
Replicate 12.7895289180406
Replicate 22.3048286888745
Replicate 36.039595577127
Condition 3: 24 Hour
Replicate 12.4493863045833
Replicate 24.6663025139196
Replicate 33.4038745082697


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138522.p1 GENE.R_Transcript_138522~~R_Transcript_138522.p1 ORF type:complete len:553 (+),score=43.70,AMP-binding|PF00501.24|2.4e-89,AMP-binding_C|PF13193.2|2.1e-23 R_Transcript_138522:102-1760(+)
ATGGATCTTCTGGCACAATTCCCACCAAACTCAGCCTCTCTTACACCAATAGGTTTCTTAGAAAGAGCTGCCACAGTCTATGGTGATTCCCCCTCTATTGTCTACAACAACATCTCCTACACTTGGGAGGAGACTTACCAACGATGCCTTCAGACAGCATCGTCGATCTCCTCCATGGGTATAAAGCGGGGTCAAGTGGTGTCAGTCTTGGCCCCGAACATCCCCGCCATGAACGAGCTCCATTTCTCGGTTCCCATGGCGGGGGCAATCCTTAACAACCTCAACACTCGCCTTCATCATGACACTCTTTCACATATCCTTGGTCACAGCGAATCAGAACTCATCTTTGTTGATCAGCTCCACCATCCTCTTCTCAATAAAGCCCTCGCTCGATTCCCACCTAAAACTCGACCTCGTGTCATCCTCATCAAGGATAAGGATGCTGCTGCTGATCTCCATGATGAATCAATCCCAGCCGTTGAGGATTACGATCAGTTAGTTGACGGTGGAAATTCGAGCTTTGAGTGGGTCCGTCCCAAGAGCGAGTGGGACCCTATTGCCCTAAACTACACCTCCGGAACCACCAACTTACCAAAAGGAGTACTCCACAGCCATAGAGGATACTTCATACAAACACTTGACACACTCCAAAACTGGTCTGTCCCAAATGAGCCTGTATATTTGTGGACCCTACCCATGTTTCATGTCAACGGTTGGAGTTTGGCGTGGGGGATGGCCGCGGTGGGGGCAACCAATGTCTGTATGAGACGAGTTGATGCCCCCACCATCTACGCGGCCATCCAGAAGCACCAAGTCACCCACATGTCGTGCGCCCCTGTGGTGCTCACTATGCTAGCTAACATGCCCAATGCCAAGCCGCTAGAAAAGCCGGTCCACGTCATCACGGCCGGGTCCCCACCCCCGGCCTCTGTCCTCCAGCAGGTCGAGTCTCTCGGGTTCGTGGTCAGTCACGGATACGGGCTTACCGAAACTAGTGCGATTGTTGTGCACTCCACTTGGAGGTCCAAGTGGGACCGCCTCCCCTCCAAAGATCGGGCCAGGCTAAAAGCAAGGCAGGGCGTGGGGTCCCTAGGAATGACAGAGGTGGACGTTCTTGATCTCAAAACAGATCAGCCCGTCAAACGAGACGGGCTGACCCTAGGGGAAGTGGTCCTAAGAGGAGGGACCCTAATGTTAGGCTACCTAAAAGACCCCGAAGCTACCTCCAAGGCCACGACCCGAACCGGATGGTTCCGGACCGGGGACCTGGGGGTCATACATAGTGATGGGTACTTGGAAATCAAAGACAGGCTGAAGGATATAATAATGAGTGGGGGGGAGAACATAAGCAGCGTGGAGGTGGAGGAGGTGTTGTACACCCACCCCGCAGTGAACGAGGCGGCGGTGGTGGCTCAGCCTGACGAGTTGTGGGGAGAATCTCCATGTGCTTTTATTAGCCTCAAGAAAGAATGGGTTGGTGGTACTGAGAAGGAGATAATAGAGTTTTGTAGAGACAGAATGGCTCATTACATGGTGCCTAAGACAGTTGTTATCCTAGATGATCTCCTAAAGACTTCCACCGGAAAGATCCAGAAGACTTTGCTCAAGAAAATAGCCAAAGACATGGAGAAACCCGAAGAAGGGAATGAGTTCCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138522.p1 GENE.R_Transcript_138522~~R_Transcript_138522.p1 ORF type:complete len:553 (+),score=43.70,AMP-binding|PF00501.24|2.4e-89,AMP-binding_C|PF13193.2|2.1e-23 R_Transcript_138522:102-1760(+)
MDLLAQFPPNSASLTPIGFLERAATVYGDSPSIVYNNISYTWEETYQRCLQTASSISSMGIKRGQVVSVLAPNIPAMNELHFSVPMAGAILNNLNTRLHHDTLSHILGHSESELIFVDQLHHPLLNKALARFPPKTRPRVILIKDKDAAADLHDESIPAVEDYDQLVDGGNSSFEWVRPKSEWDPIALNYTSGTTNLPKGVLHSHRGYFIQTLDTLQNWSVPNEPVYLWTLPMFHVNGWSLAWGMAAVGATNVCMRRVDAPTIYAAIQKHQVTHMSCAPVVLTMLANMPNAKPLEKPVHVITAGSPPPASVLQQVESLGFVVSHGYGLTETSAIVVHSTWRSKWDRLPSKDRARLKARQGVGSLGMTEVDVLDLKTDQPVKRDGLTLGEVVLRGGTLMLGYLKDPEATSKATTRTGWFRTGDLGVIHSDGYLEIKDRLKDIIMSGGENISSVEVEEVLYTHPAVNEAAVVAQPDELWGESPCAFISLKKEWVGGTEKEIIEFCRDRMAHYMVPKTVVILDDLLKTSTGKIQKTLLKKIAKDMEKPEEGNEFP*

Click here to download the sequence:
Link to NCBI Protein BLAST