Transcript Information: R_Transcript_138523.p1


Annotated TAIR IDAT5G16340.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5349255-5350907 | Reverse length=550
E-Value2.7E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8344684376602
Replicate 22.2156899936797
Replicate 33.7986047270001
Condition 2: 8 Hour
Replicate 11.1074009272623
Replicate 21.7978598465275
Replicate 31.0945694846464
Condition 3: 24 Hour
Replicate 11.2690245201243
Replicate 21.1083044668632
Replicate 32.4197462467927


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138523.p1 GENE.R_Transcript_138523~~R_Transcript_138523.p1 ORF type:5prime_partial len:199 (+),score=26.56,AMP-binding|PF00501.24|6.9e-25,AMP-binding_C|PF13193.2|1e-22 R_Transcript_138523:1-597(+)
GCAAGGCAGGGCGTGGGGTCCCTGGGGATGACAGAGGTGGATGTTTTAGACCCCAAAACAGGTCAGCCCGTCAAACGAGACGGGCTGACCCCAGGAGAGGTGGTCCTAAGAGGAGGGAGCCTCATGTTGGGGTACTTAAAAGACCCCGAAGCGACCTCCAAGGCCATGACCCCGGCCGGTTGGTTCCGAACTGGGGACATGGGGGTCATACATAGTGATGGGTACTTGGAAATCAAAGACAGGCTGAAGGATATAATAATAAGTGGGGGAGAGAATATAAGTAGTGTGGAGGTGGAATCGGTGTTATACAGCCACCCCGCCATCGACGAGGTGGCGGTGGTGGCTCGGCCCCACGAGTATTGGGGAGAGTCTCCTTGTGCCTTTATTAGCCTCAAGAAGGATTGCAATGGTGGTAATATTACTGAGAAGGAGATAATAGAGTTTTGTAGAGACAGAATGGCTCATTACATGGTGCCTAAGACAGTTGTTATCCTAGATGATCTCCTAAAGACTTCCACCGGAAAGATCCAGAAGACTTTGCTCAAGAAAATAGCCAAAGACATGGAGAAACCCGAAGAAGGGAATGAGTTCCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138523.p1 GENE.R_Transcript_138523~~R_Transcript_138523.p1 ORF type:5prime_partial len:199 (+),score=26.56,AMP-binding|PF00501.24|6.9e-25,AMP-binding_C|PF13193.2|1e-22 R_Transcript_138523:1-597(+)
ARQGVGSLGMTEVDVLDPKTGQPVKRDGLTPGEVVLRGGSLMLGYLKDPEATSKAMTPAGWFRTGDMGVIHSDGYLEIKDRLKDIIISGGENISSVEVESVLYSHPAIDEVAVVARPHEYWGESPCAFISLKKDCNGGNITEKEIIEFCRDRMAHYMVPKTVVILDDLLKTSTGKIQKTLLKKIAKDMEKPEEGNEFP*

Click here to download the sequence:
Link to NCBI Protein BLAST