Transcript Information: R_Transcript_138609.p1


Annotated TAIR IDAT1G01860.1
Annotated Gene NameRibosomal RNA adenine dimethylase family protein
Annotated Gene Symbol(s)PFC1
Annotation TypeOrtholog
Chromosome Positionchr1:304439-306275 | Reverse length=343
E-Value5.7E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7138029423633
Replicate 20.41054218691086
Replicate 30.89579420767077
Condition 2: 8 Hour
Replicate 10.41037762481417
Replicate 20.87444789323072
Replicate 31.4703818658973
Condition 3: 24 Hour
Replicate 11.0901752035502
Replicate 21.6633854470547
Replicate 30.91708259861302


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138609.p1 GENE.R_Transcript_138609~~R_Transcript_138609.p1 ORF type:5prime_partial len:358 (+),score=63.43,RrnaAD|PF00398.16|6.7e-43 R_Transcript_138609:1-1074(+)
AACTTGCATACCCAAAATCCTGGCGTTCTGTATGTGTTGTCGCCGGACAGACACGAAACAATGCTCTCCTTTGCTCAATCCTTCCCGCCAAATCCAATAACATCTCCGCTCCCCTCAAATCTTCATCATAAACCATCATTTCCACCTCTCACCAGCTTCCCCAAGCAAAAAAAATTCAAGTTTATAGCCTTTGCTGGAAACCCAGATGACTACCATGCTACTCTCAAAGCTCTAAACTCCAGAAACCGCTTTCCCAGAAAATCACTCGGCCAGCATTATATGTTGAACTCTACCATCAATGAGCAGCTTGTCTCTGTTGCCAATGTGAAAGATGGGGATGTGGTTCTTGAGATTGGGCCCGGTACTGGCTCCTTGACTAATGTTCTTATTCAAGCTGGTGCCACGGTTCTGGCCATTGAAAAGGATCCACACATGGCTGCCCTTGTTGAGGAACGATTCGCAGATACAGGCCACCTTACGGTTCTAGGGGAGGACTTCACAAAGTGTCATATTCGCTCCCATATGCTATCTTTATTAGAAAGTAAAGAGCTGTCAAATGCAGGAACCAGAGATGCTAAAGTGGTGGCGAATATACCATTCAACATTAGTAAGGATGTAGTGAAGCAGCTACTTCCCATGGGTGACATTTTTTCAGAAGTTGTTCTTTTACTTCAGGATGAGGCAGCTATAAGGTTGGTTGAATCATCTAAAAGGTCATCAGAGTACCGCCCTATAAACATATTTGTAAATTTCTACTCAGATCCAGAGTACAACTTTAAAGTCCCACGGGAAAACTTCTTCCCTCAACCCTATGTTGATGCTGCTGTTGTCACCTTCAATCTGAAGCAGCCTTCCAACTATCCCTCAGTCTCCTCCATCAAAAGCTTCTTCTCAATGGTCAATTCTGCATTTAATGGGAAGCGGAAGATGCTGAGGAAAACACTGCAGCACATACACACATTGTCAGAAATTGAGGCCGCACTAAAGAGTGTCAGTCTGCCAGCTACTTCAAGGCCAGAGGAACTGGCACTCGATGAATTTGTAAAACTACATAACTCCATAATGAGCACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138609.p1 GENE.R_Transcript_138609~~R_Transcript_138609.p1 ORF type:5prime_partial len:358 (+),score=63.43,RrnaAD|PF00398.16|6.7e-43 R_Transcript_138609:1-1074(+)
NLHTQNPGVLYVLSPDRHETMLSFAQSFPPNPITSPLPSNLHHKPSFPPLTSFPKQKKFKFIAFAGNPDDYHATLKALNSRNRFPRKSLGQHYMLNSTINEQLVSVANVKDGDVVLEIGPGTGSLTNVLIQAGATVLAIEKDPHMAALVEERFADTGHLTVLGEDFTKCHIRSHMLSLLESKELSNAGTRDAKVVANIPFNISKDVVKQLLPMGDIFSEVVLLLQDEAAIRLVESSKRSSEYRPINIFVNFYSDPEYNFKVPRENFFPQPYVDAAVVTFNLKQPSNYPSVSSIKSFFSMVNSAFNGKRKMLRKTLQHIHTLSEIEAALKSVSLPATSRPEELALDEFVKLHNSIMST*

Click here to download the sequence:
Link to NCBI Protein BLAST