Transcript Information: R_Transcript_138716.p1


Annotated TAIR IDAT5G60580.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24354298-24356706 | Forward length=494
E-Value1.8E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6987820279474
Replicate 21.8709574628384
Replicate 33.1751913499617
Condition 2: 8 Hour
Replicate 14.1213832089423
Replicate 23.3209230457206
Replicate 33.9538161747378
Condition 3: 24 Hour
Replicate 13.1822703087907
Replicate 22.8387956987872
Replicate 32.3838094213453


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138716.p1 GENE.R_Transcript_138716~~R_Transcript_138716.p1 ORF type:5prime_partial len:101 (-),score=18.03,RINGv|PF12906.3|1.5e-11 R_Transcript_138716:540-842(-)
AGCACAGAAGAAGACGATGGTGAAGATATACCTGAAGAGGTTGCTGTGTGTAGAATATGTTTGGTTGAATTATGTGAAGGCGGAGAAACCCTGAAGATGGAATGCTCTTGTAAGGGTGACATGGCTCTAGCACACCAAGAATGTGCTTTGAAATGGTTTAGCATCAAAGGGAACAAGACGTGTGATGTATGCAAACAAGAGCTTCGTAATCTACCAGTCACTCTTCTACGTATCCAGAGTACTCGTGGAGTGGATGCAGGAACTAACAAAGCTCGAAGACTTCAATTTAGCGATTTCAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138716.p1 GENE.R_Transcript_138716~~R_Transcript_138716.p1 ORF type:5prime_partial len:101 (-),score=18.03,RINGv|PF12906.3|1.5e-11 R_Transcript_138716:540-842(-)
STEEDDGEDIPEEVAVCRICLVELCEGGETLKMECSCKGDMALAHQECALKWFSIKGNKTCDVCKQELRNLPVTLLRIQSTRGVDAGTNKARRLQFSDFR*

Click here to download the sequence:
Link to NCBI Protein BLAST