Transcript Information: R_Transcript_138834.p1


Annotated TAIR IDAT2G02980.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)OTP85
Annotation TypeHomolog
Chromosome Positionchr2:868468-870279 | Forward length=603
E-Value1E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0943959458932
Replicate 20.49455953871366
Replicate 31.4715248991104
Condition 2: 8 Hour
Replicate 10.78648388481516
Replicate 20.9576394792799
Replicate 31.7879530803807
Condition 3: 24 Hour
Replicate 11.7206065374082
Replicate 21.2751434476351
Replicate 31.5935373861981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138834.p1 GENE.R_Transcript_138834~~R_Transcript_138834.p1 ORF type:complete len:467 (+),score=74.01,PPR|PF01535.16|43,PPR|PF01535.16|0.26,PPR|PF01535.16|7.4e-08,PPR|PF01535.16|58,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.45,PPR|PF01535.16|0.0012,PPR|PF01535.16|5.6e+02,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|0.0082,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|0.009,PPR_2|PF13041.2|2e-08,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|4,PPR_2|PF13041.2|4.2e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0062,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|33,PPR_1|PF12854.3|0.00082,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|46,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.1e+02,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|38,TPR_14|PF13428.2|0.21,TPR_14|PF13428.2|1.6e+04 R_Transcript_138834:223-1623(+)
ATGATAGTAAAGAACCAACCCTTAGACCATTACTCTTTCATGAAACTTTTAGATACTTGCATTTCCTCAAATGGGTTCACTTATTCTGCTCTTTTTTTCACAAAGTTTCGTTCTTTTATTGATTCCCATCTTTGTAACTCTGCTCTTAGAAGCTACACCCACTTAAAGAAACACTGGCACTCTGTTTTTCTCTATGTACAAATGCATAAACATGGTATATCCCCTGATTCTCTGACTTTTCCTGCTGTGATTAAGTCTACAGCACATTTATGTTGTCTTAGAGTAGGAAAATCATTTCATTGTTGTGTGGTTAAGATGGGTTTTGGGTTAGACTTGTATGCAAACACTGCCCTTGTTCATATGTATGGTATTTGTTCGTCGATTGATGATGCTCAGAAGGTGTTTGATGAAATGCCTGGGAGAAATTCTGTTTCTTGGAATGCCTTGATCACTGGTTATGTACATAATAAACGGTTTATGAAAGCAATTGACTTGTTTAAGGAGATGTTGAATGCGGGGGCTGAGCCTAGGGAGGTAACTATGGTGGAGGTTTTATCGGCTTGTGCTAACTTAGGAAATTTGGATGGAGGGAAATGGGTTCATGACTATATAAGAATGAATGGGTTGATATTGAATGTGTATGTTGGTACTGCTCTTATTGACATGTATGCTAAATGTGGGAATCTTGAGGAGGGGTATGAGGTTTTTAGAGCAATGAGAGTGAAAAATGTGTGTACTTGGAATGTATTGATATTAGCATATGCAATGAATGGGCGACCGGAGGATGCTTTGATTGCATTTTATAGGATGACTTTTGAAGATTATAAGCCAGATGATGTCACTTTTCTGGCAGTGTTATCTGCTTGTTTCAATCAAGGTCTTGTTGGCGAGGGCCGATCACATTTTAGAAGCATGAGAGAGGAGTTTGGGTTGGAGCCAAAGATTGAGCACTATAGCTGTATGGTTGATCTGCTGGGGCGAGCGGGCTTTGTTGACGAAGCCATGGAGATGATCAGAACCATGCCCTTAAAACGTGACCCAACTATTTGGCGGGCGTTGCTTCGTTCAAGCCAATATCATGGAAATTCCCACTTCGCTGAGCTTGTGATACTGAAACTCATTGAACTCGAACCAAACAATGGAGATAACTTTTTAGTACTGTCAAATCTATATGCCCAACAGCAGAGGTGGGCTGAAGTTGGAGCACTGAGGGAAATTATGAAGGATAGAGGTATTCAGAAGATTCCTGGTTTCAGTGCAATTGAAACCAATGGTACAACTAATGAGTTTGTGGTGTCTTGCAATCTTGAACCTCAATTTGAGGAGTTATATGAGCTATTGGCAAATATTTACAAGGAGTTAACACCATTAGGTTGTGCTGTCGGTTGCGAAATGTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138834.p1 GENE.R_Transcript_138834~~R_Transcript_138834.p1 ORF type:complete len:467 (+),score=74.01,PPR|PF01535.16|43,PPR|PF01535.16|0.26,PPR|PF01535.16|7.4e-08,PPR|PF01535.16|58,PPR|PF01535.16|4.7e-05,PPR|PF01535.16|0.00017,PPR|PF01535.16|0.45,PPR|PF01535.16|0.0012,PPR|PF01535.16|5.6e+02,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|0.0082,PPR_2|PF13041.2|11,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|0.009,PPR_2|PF13041.2|2e-08,PPR_2|PF13041.2|0.1,PPR_2|PF13041.2|4,PPR_2|PF13041.2|4.2e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|1,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0062,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|33,PPR_1|PF12854.3|0.00082,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|46,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|8.6,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.1e+02,TPR_14|PF13428.2|1.5e+02,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|38,TPR_14|PF13428.2|0.21,TPR_14|PF13428.2|1.6e+04 R_Transcript_138834:223-1623(+)
MIVKNQPLDHYSFMKLLDTCISSNGFTYSALFFTKFRSFIDSHLCNSALRSYTHLKKHWHSVFLYVQMHKHGISPDSLTFPAVIKSTAHLCCLRVGKSFHCCVVKMGFGLDLYANTALVHMYGICSSIDDAQKVFDEMPGRNSVSWNALITGYVHNKRFMKAIDLFKEMLNAGAEPREVTMVEVLSACANLGNLDGGKWVHDYIRMNGLILNVYVGTALIDMYAKCGNLEEGYEVFRAMRVKNVCTWNVLILAYAMNGRPEDALIAFYRMTFEDYKPDDVTFLAVLSACFNQGLVGEGRSHFRSMREEFGLEPKIEHYSCMVDLLGRAGFVDEAMEMIRTMPLKRDPTIWRALLRSSQYHGNSHFAELVILKLIELEPNNGDNFLVLSNLYAQQQRWAEVGALREIMKDRGIQKIPGFSAIETNGTTNEFVVSCNLEPQFEELYELLANIYKELTPLGCAVGCEML*

Click here to download the sequence:
Link to NCBI Protein BLAST