Transcript Information: R_Transcript_138943.p1


Annotated TAIR IDAT2G20030.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8647813-8648985 | Forward length=390
E-Value4.2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4889185970014
Replicate 20.65613438800931
Replicate 30.92035999270255
Condition 2: 8 Hour
Replicate 10.21862379417183
Replicate 20.099825365362436
Replicate 30.08103397598387
Condition 3: 24 Hour
Replicate 10.20498042167593
Replicate 20.49230488595039
Replicate 30.39085186940888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138943.p1 GENE.R_Transcript_138943~~R_Transcript_138943.p1 ORF type:5prime_partial len:224 (+),score=11.30,zf-RING_2|PF13639.2|3.5e+03,zf-RING_2|PF13639.2|7.4e+02,zf-RING_2|PF13639.2|3.7e-11,zf-RING_11|PF17123.1|2.7e+03,zf-RING_11|PF17123.1|3.1e+03,zf-RING_11|PF17123.1|2.8e-07,zf-rbx1|PF12678.3|5.7e+03,zf-rbx1|PF12678.3|1.2e-06 R_Transcript_138943:1-672(+)
ATCAGTTGCCTAGGGGGTGCAAACTATAGCGTTATGGCTAGTTTTTCGAAGCGAAATAAGGAGGTTTTATCAAAATGTCAAGACTACGGTTCAATTGTGGTGTCAAGTGGAATGAATATAGTTGATGTGGCTAATCAACTTCGACTTATATGGATTGAACCTGATTGTTCGCTGTGTTATATTGGTGGAGGAAAATGTGGGTTAAAAAGTTCTGGTACTAAACTTTTATGCACAGGAATTTCAGTGACTTCACCCTATGCCTTCATCTTTGCATTCATTGTGCCGGTGATTCTGTTCATGCTGGGTTCATTTTGCTTGATTTGCGTAAGGGACAACCACCACCACAACACAGATTGGACAACAAGCGGAACTCATCTATTAGAGCTAATAGTAGGTATGCCATCAACTCAGCACCAAGCAAGTCGTGGCCTTGATCAGCGTACCATCGACTCATACACGGTGGTTGTGCTTGACGAGACCAAGATTCTACCTAGACAAAATTACAACCATGACAATAGCTGTTCAATATGTTTGTCGGACTACCAGCCTAAGGAGACCCTAAGAACATTGCCAGATTGCCACCATTGCTTCCATGCTTGTTGCATCGATCAATGGCTTCGTTTGAAGGCCATCTGCCCTGTCTGCCGCCTTTCCCTGCCTCCCTTAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138943.p1 GENE.R_Transcript_138943~~R_Transcript_138943.p1 ORF type:5prime_partial len:224 (+),score=11.30,zf-RING_2|PF13639.2|3.5e+03,zf-RING_2|PF13639.2|7.4e+02,zf-RING_2|PF13639.2|3.7e-11,zf-RING_11|PF17123.1|2.7e+03,zf-RING_11|PF17123.1|3.1e+03,zf-RING_11|PF17123.1|2.8e-07,zf-rbx1|PF12678.3|5.7e+03,zf-rbx1|PF12678.3|1.2e-06 R_Transcript_138943:1-672(+)
ISCLGGANYSVMASFSKRNKEVLSKCQDYGSIVVSSGMNIVDVANQLRLIWIEPDCSLCYIGGGKCGLKSSGTKLLCTGISVTSPYAFIFAFIVPVILFMLGSFCLICVRDNHHHNTDWTTSGTHLLELIVGMPSTQHQASRGLDQRTIDSYTVVVLDETKILPRQNYNHDNSCSICLSDYQPKETLRTLPDCHHCFHACCIDQWLRLKAICPVCRLSLPPLS*

Click here to download the sequence:
Link to NCBI Protein BLAST