Transcript Information: R_Transcript_138944.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value5E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66547253480745
Replicate 20.7654901193442
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 21.1646292625618
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138944.p1 GENE.R_Transcript_138944~~R_Transcript_138944.p1 ORF type:5prime_partial len:192 (+),score=11.98,zf-RING_2|PF13639.2|6.1e+02,zf-RING_2|PF13639.2|1.7e-12,zf-RING_11|PF17123.1|2.1e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|4.8e+03,zf-rbx1|PF12678.3|2e-06 R_Transcript_138944:3-578(+)
TTCTTAAGAGCCTGGGTACCGTGTCCCCCCTTTTTCCAGAGCAAATTTTTTTGTGGGAGGCAAGGTCCTGCACAAGGTTGTTATATTGGTGGTGGAAAATGCGGGTTAAAAAGAAGTTCTGGTTCTAAAGTTGTATGCACAGGAATTTCAGTGACTTCACCCTATGCCTTCATCTTTGCATTCATTGTGCCGGTGATTCTGTTCATGCTGGGTTCATTTTGCTTGATTTGCGTAAGGGACAACCACCACCACAACACAGATTGGACAACAAGCGGAACTCATCTATTAGAGCTAATAGGTATGCCATCAATTCAGCACCAAGCAAATCGTGGGCTTGATCAGCTTACCATCGACTCATACCCGGTGGTTGTACTTGACGAGACAAAGATTCTACCTAGTCAGCATTACAACCATGACAATAGCTGTTCAATATGTTTGTCGGACTACCAGCCTGAGGAGTCCCTAAGAACTTTGCCAGGTTGCCACCATTGCTTCCATGCTTCTTGTATCGATCAATGGCCTCGTTTGAAGGCCATCTGCCCTGTCTGCCGCCTTTCCCTGCCTCCCTTAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138944.p1 GENE.R_Transcript_138944~~R_Transcript_138944.p1 ORF type:5prime_partial len:192 (+),score=11.98,zf-RING_2|PF13639.2|6.1e+02,zf-RING_2|PF13639.2|1.7e-12,zf-RING_11|PF17123.1|2.1e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.6e+04,zf-rbx1|PF12678.3|4.8e+03,zf-rbx1|PF12678.3|2e-06 R_Transcript_138944:3-578(+)
FLRAWVPCPPFFQSKFFCGRQGPAQGCYIGGGKCGLKRSSGSKVVCTGISVTSPYAFIFAFIVPVILFMLGSFCLICVRDNHHHNTDWTTSGTHLLELIGMPSIQHQANRGLDQLTIDSYPVVVLDETKILPSQHYNHDNSCSICLSDYQPEESLRTLPGCHHCFHASCIDQWPRLKAICPVCRLSLPPLS*

Click here to download the sequence:
Link to NCBI Protein BLAST