Transcript Information: R_Transcript_138945.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3202273851705
Replicate 20
Replicate 30.53583011920824
Condition 2: 8 Hour
Replicate 10.2863843853479
Replicate 20.26153078176825
Replicate 30
Condition 3: 24 Hour
Replicate 10.40276854785446
Replicate 20
Replicate 30.38399481906837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138945.p1 GENE.R_Transcript_138945~~R_Transcript_138945.p1 ORF type:complete len:171 (+),score=4.79 R_Transcript_138945:837-1349(+)
ATGTCACTCAAGGATCCAATTGGGAATTGCTTACCAAAGCGACTTCTCACCCTTAATCTCTCTAGAACCCCATTTACAGTACCAAATAACCAGACTTTGTTATTGTATAAGTGTACAAAGGGTTATGTTTCTGAGTTTTTGGTGCCTATCAGTTGCCTAGGGGGTGCAAATTATAGCGTTATGTCTAGTTTTTCAAAGCGAAATAAGGAGGTTTTGTCGAAGTGTCAAGACTGTGGTTCAATTGTGGTGTCAAGTGGAATGTATATAGTTGATGTGGTTGATGAACTTCGACTTATATGGATTCAACCTGATTGTTCGCAGTGTTATATTGGTGGTGGAAAATGCGGGTTAAAAAGAAGTTCTGGTTCTAAAGTTGTATGCACAGGTCTGGTCATTTTACCCTTTTTCTTCCGTTTTATTGGAATTCCAATTTGTAACATAAAAATTGTCTCTTTGATAAGGAGTAACTTAACAATATTTGCCTCCACTTTAAAGTTAATGGTAAGGTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138945.p1 GENE.R_Transcript_138945~~R_Transcript_138945.p1 ORF type:complete len:171 (+),score=4.79 R_Transcript_138945:837-1349(+)
MSLKDPIGNCLPKRLLTLNLSRTPFTVPNNQTLLLYKCTKGYVSEFLVPISCLGGANYSVMSSFSKRNKEVLSKCQDCGSIVVSSGMYIVDVVDELRLIWIQPDCSQCYIGGGKCGLKRSSGSKVVCTGLVILPFFFRFIGIPICNIKIVSLIRSNLTIFASTLKLMVRW*

Click here to download the sequence:
Link to NCBI Protein BLAST