Transcript Information: R_Transcript_138969.p1


Annotated TAIR IDAT1G33350.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12090071-12091687 | Reverse length=538
E-Value5.3E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72354079460146
Replicate 20.37831171921258
Replicate 30.66037441718638
Condition 2: 8 Hour
Replicate 10.57354278254809
Replicate 20.4834785262959
Replicate 31.2101073746925
Condition 3: 24 Hour
Replicate 10.78594295013762
Replicate 20.59608807812371
Replicate 31.0253699492961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_138969.p1 GENE.R_Transcript_138969~~R_Transcript_138969.p1 ORF type:5prime_partial len:555 (+),score=90.14,PPR|PF01535.16|0.00069,PPR|PF01535.16|12,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00034,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|0.99,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|10,PPR|PF01535.16|0.97,PPR|PF01535.16|43,PPR|PF01535.16|96,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|17,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|28,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|44,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|54,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|5.5e+03,PPR_1|PF12854.3|0.096,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|3.6e-05,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|33,PPR_1|PF12854.3|2e+03 R_Transcript_138969:3-1667(+)
AGAACATGCAATGCAAGAGAGGTGAACATGTTAACTCTCTCTCAAATCCTGAACCAAACCCAGTCAATAGATCTCATACTTGACAAATGCAAAACCCTCAACCATCTCAAACAGCTTCAAGCCTCTCTCTTCACTCATGGCCAATCCCAACTCCCTTACTTTGCTTTCAGACTTATTCGCTTTTGTACCCTTCATCTATCCAACCTCCAATACGCTCATTCCATCTTCAACCATTCAAACTCACCAAATGTCTATCTCTACAGTGCCATGATCAACGCTTATGCTTCACAAAACGACCTCGACCAAGTTCTTATCATGTACAAGGACATGCTTCATAAAGGCAGGCCACGTCCTAACCATTTCATCTATCCTCAAGTGTTAAAATCATTTTCAGAGAGATTAGGTTGTTATGGGACGAAACTGGTCCATCCCCAGATACTTAAAACGGGTTTTGGATCAAATCCGATTGTGCAAACTGCTCTGGTGGATTCATATGTGAAGTTTTGTGCTGATGTTGATAGTGCACGCCATCTGTTCGACGAAATGTCTGAGAGAAATGTTGTTTCTTGGACGGCTATGGTTTCTGGGTATGCAAGGTTAGGGGAGATGGGGAATGCAATTTTGCTTTTTGAGCAAATGCCCGAGAGAGATGTTCCCTCTTGGAATTCCATCATTGCTGGTTGCACTCAGAACGGGTTGTTCTTAGAAGCAATTTTTTTCCTTAGGAGAATGTTAATGTTAGCCTTGGATGAGGTGCAGGTTAGTCCAAATCACGTTACATTTGCTTGTGCTCTCTCTGCTTGTGGTCACACAGGTATGCTTCAGCTTGGGAAGGAAATTCATGGTTATAGTTATAGAAAGGGACTTGTTCCTGATTCACATATCTCAAATGCTTTGGTTGATTTGTATGGGAAATGTGGTTCCTTAAAGGAGGCTAGACACACTTTTGATGCTTCCCCTTGTAAAAATTTGACATCTTGGAATACAATGATCAATTGTTATGCACTTCATGGGCAAAGTAGGAATGCCCTTGATATTTTTGAGGAAATGTTGCAGTACGCTGTTGATGATGTGAAACCTGATGAAATCACCTTTATTGGTCTGTTAAATGCTTGTACACATGGAGGAATGGTTGAAATGGGGTACTATTATTTTGACATAATGACTAAAGTCTATGGCATTGAACCTCAAATTGAGCATTATGGCTGCATAGTAGATCTTCTTGGCCGGGCAGGCCGTTTTCAAGAAGTTATGGATACTATTAATGGAATGAAAGTCGAAACAGATGAAGTTATCTGGGGTTCCCTGCTTAACGGGTGCAGAATTCATGGCAACGCGAATTTAGCAGAGTTTGCTGTCAGAAAGTTGATCGAGATTGATCCAAATAACGGCGGCTATGCTTCAATGTTGGCCAATTTATACGTGGGATTAGGTAGATGGGATGAGGTACATGGAGTGAGGAAGAAGTTGAAGGAGCAGAATGGTCAAAAGGTGCCTGGTTGCAGCTGGATTGAGGTTGACTACAGAATTCACCAGTTCCATTCATCTGACTACACTCATCCCAGAATTGAAGAGATATACAGTGTATTGGACAGTATTTTTGATTTTATTAGTCAAGGGTTGCTTAGTCATGTTTGTGATGGGAACAGTAATTTGACATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_138969.p1 GENE.R_Transcript_138969~~R_Transcript_138969.p1 ORF type:5prime_partial len:555 (+),score=90.14,PPR|PF01535.16|0.00069,PPR|PF01535.16|12,PPR|PF01535.16|2e-06,PPR|PF01535.16|0.00034,PPR|PF01535.16|4.8e+02,PPR|PF01535.16|0.99,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|10,PPR|PF01535.16|0.97,PPR|PF01535.16|43,PPR|PF01535.16|96,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|17,PPR_2|PF13041.2|1.6e-08,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|28,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|44,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|32,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|54,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|5.5e+03,PPR_1|PF12854.3|0.096,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|3.6e-05,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|0.008,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|33,PPR_1|PF12854.3|2e+03 R_Transcript_138969:3-1667(+)
RTCNAREVNMLTLSQILNQTQSIDLILDKCKTLNHLKQLQASLFTHGQSQLPYFAFRLIRFCTLHLSNLQYAHSIFNHSNSPNVYLYSAMINAYASQNDLDQVLIMYKDMLHKGRPRPNHFIYPQVLKSFSERLGCYGTKLVHPQILKTGFGSNPIVQTALVDSYVKFCADVDSARHLFDEMSERNVVSWTAMVSGYARLGEMGNAILLFEQMPERDVPSWNSIIAGCTQNGLFLEAIFFLRRMLMLALDEVQVSPNHVTFACALSACGHTGMLQLGKEIHGYSYRKGLVPDSHISNALVDLYGKCGSLKEARHTFDASPCKNLTSWNTMINCYALHGQSRNALDIFEEMLQYAVDDVKPDEITFIGLLNACTHGGMVEMGYYYFDIMTKVYGIEPQIEHYGCIVDLLGRAGRFQEVMDTINGMKVETDEVIWGSLLNGCRIHGNANLAEFAVRKLIEIDPNNGGYASMLANLYVGLGRWDEVHGVRKKLKEQNGQKVPGCSWIEVDYRIHQFHSSDYTHPRIEEIYSVLDSIFDFISQGLLSHVCDGNSNLTY*

Click here to download the sequence:
Link to NCBI Protein BLAST