Transcript Information: R_Transcript_13900.p1


Annotated TAIR IDAT3G19950.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6942853-6943839 | Forward length=328
E-Value4E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.733538175053
Replicate 213.189225331928
Replicate 313.292360407908
Condition 2: 8 Hour
Replicate 112.622290944636
Replicate 213.479517504264
Replicate 317.07785337242
Condition 3: 24 Hour
Replicate 118.301575902649
Replicate 217.147187193801
Replicate 319.668106465128


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13900.p1 GENE.R_Transcript_13900~~R_Transcript_13900.p1 ORF type:complete len:355 (+),score=58.32,zinc_ribbon_9|PF14369.2|4e-15,zinc_ribbon_9|PF14369.2|3e+03,zinc_ribbon_9|PF14369.2|4.8e+03,zf-RING_2|PF13639.2|75,zf-RING_2|PF13639.2|8.8e-13,zf-RING_11|PF17123.1|1.4e-08,zf-C3HC4_2|PF13923.2|2.1e+02,zf-C3HC4_2|PF13923.2|2.7e-06,zf-C3HC4|PF00097.21|14,zf-C3HC4|PF00097.21|9.8e-06 R_Transcript_13900:128-1192(+)
ATGTCAAGTGCCGGCGTAACAATCGCAACCCCACAATCCTATTTCTGCTACCAATGTAATCGCACCGTCACTCTCACCCCTTTACCCAATTCCGACCTCTCTTGCCCCGATTGCAATGGCGGTTTCCTTGAAGAATCCGATTTTGATCCTCCAAACCCTAACCCTAATTCTAATATTTTCCCTTCTTCCCCCTTATTCTCCGACCCTTTCTCTCTCTACGGCGACCCCTTCTTCTCCTCCGCCCCCACCACCACCACCACCGCCAGTCGGGGCCCGATTATCTTCTCTTCCACCACTATTGACCTTGAAAACCCTAGAAACTTCTCGAACGTCTTTCCTTCTTCTCCTTCTCCTGTTGCTTTTAATCCCTTCGATTTTCTTCAAGCTCATCTCCAGAACCTCAGAGCTAGTGGCGCTAATGTTCAATTTGTTGTTGATAATCATCCTTTTGAAGGTAGTGGTGCTGGTGGTGGGTTTCGATTGCCGCCCAATATTGGGGATTATTTTCTTGGGCCGGGTTTAGAGCAATTGATCCAACAGCTCGCTGAGAATGACCCGAATCGGTATGGTACTCCGCCTGCTTCGAAACGGGCTGTTGAGGGGTTGCCGGATGTGGTGGTTACTGATGAGGTGGTGGGGTCAGAGTCGAACTCGTGTGCGGTTTGTATGAATGATTTCGAGGTCGGTTTGAAGGTCAAACAGATGCCTTGTAAGCATTTGTATCATTCGGATTGTTTGTTGCCTTGGCTTGAGCTTCATAATTCGTGCCCTGTTTGTCGGTTTGAGTTGCCTACTGATGACCCTGATTATGAGAACCGAAGGGCCAACCGAGGGCAAGGAGGATCGAGTGGTGGTGGCGAGGGTGGAGGTCAGGGAGGTTCACAAGGGGGTGGAGGTCAAAGTGTGGAAAGGAGGTTTAGGATTTCGTTGCCTTGGCCTTTTAGCACATTCGTCTCGCCTGGTGATGGTGGTGATAATAATAACAGTAATAGTGGGTCGAGCTCTGGGGGTCAGCAAAGTGGGGGTCGCGGTGGTTCTTCCGGGCCTATGGAAGGGTTGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13900.p1 GENE.R_Transcript_13900~~R_Transcript_13900.p1 ORF type:complete len:355 (+),score=58.32,zinc_ribbon_9|PF14369.2|4e-15,zinc_ribbon_9|PF14369.2|3e+03,zinc_ribbon_9|PF14369.2|4.8e+03,zf-RING_2|PF13639.2|75,zf-RING_2|PF13639.2|8.8e-13,zf-RING_11|PF17123.1|1.4e-08,zf-C3HC4_2|PF13923.2|2.1e+02,zf-C3HC4_2|PF13923.2|2.7e-06,zf-C3HC4|PF00097.21|14,zf-C3HC4|PF00097.21|9.8e-06 R_Transcript_13900:128-1192(+)
MSSAGVTIATPQSYFCYQCNRTVTLTPLPNSDLSCPDCNGGFLEESDFDPPNPNPNSNIFPSSPLFSDPFSLYGDPFFSSAPTTTTTASRGPIIFSSTTIDLENPRNFSNVFPSSPSPVAFNPFDFLQAHLQNLRASGANVQFVVDNHPFEGSGAGGGFRLPPNIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKRAVEGLPDVVVTDEVVGSESNSCAVCMNDFEVGLKVKQMPCKHLYHSDCLLPWLELHNSCPVCRFELPTDDPDYENRRANRGQGGSSGGGEGGGQGGSQGGGGQSVERRFRISLPWPFSTFVSPGDGGDNNNSNSGSSSGGQQSGGRGGSSGPMEGLD*

Click here to download the sequence:
Link to NCBI Protein BLAST