Transcript Information: R_Transcript_139012.p1


Annotated TAIR IDAT3G56750.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21018326-21020192 | Reverse length=403
E-Value6.5E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.977040111117
Replicate 22.3799332965577
Replicate 34.2697697282501
Condition 2: 8 Hour
Replicate 13.0838620840359
Replicate 23.2668290851102
Replicate 35.4409109920052
Condition 3: 24 Hour
Replicate 15.9563076686487
Replicate 24.4443846630886
Replicate 34.4657533492158


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139012.p1 GENE.R_Transcript_139012~~R_Transcript_139012.p1 ORF type:3prime_partial len:397 (+),score=61.47 R_Transcript_139012:252-1439(+)
ATGGCAAATCTAAGAAACCCAGCAAAACCCAAATCACAACTAGCAACACCAACCCTATGCCTAGCTCTCTCAATAACAGGCATTGCCTTGTTATTCTTCTTCTATTCCTTCATTTCTACAACTGGGTTTTCCTTCACTTCTCCTAAACTCATCATCCCAAGTGTCTCCATCTCCATCAAGGGCAGTAATGGAAGCTATAACTATGACAAGTTCTTGTATTGGGGTTACAGAATTGACTGCCCTGGCAAGCATTGTGACACTTGTGCTGGTTTGGGTCATCAGGAATCTAGCCTTAGATGTGCTCTTGAAGAAGCCTTGTTCCTTAAAAGGACTTTTGTGATGCCTGCTAGAATGTGTATCAATCCAATACACAATAAGAAAGCTATGCTCCAGAAAGCTAGCAACGCAAGATTGGATGAAGGGTGGATGGCTACCTCTTGTCCAATGGATGCTTTGTATGATTTGGAACTCATATCCAGCAAGATACCCATAATTTTAGATAATTCAGAAATGTGGGATCATGTATTATCAACCAGCATGAGATTGGGAAGAAGAGGTGTTGTCCATGTCGAAGGAGTGAGTCGAGTTGAGCTCAAAGAGGATATTCAATATGCAAATCTCTTGCTCATAAATCGAACTGCCAGCCCTCTTGCATGGTTTATGGAATGCAAAGATAGGAAAAACCACAGTGCTGTATTGTTGCCACATTCTTTTCTTCCATCAATGGCAGCCAAGAAGCTAAGAGAAGCAGCAGATAAGATAAAAGCGATGCTGGGTGACTATGATGCTATTCATGTCCGCCGGGGTGATATTTTAAAAACTAGGAAAGATCGGTTTGGCATGGAAAGAAGCCGACATCCTCATGTTGAAAGGGATACGAGACCAGAGTTTATTCTCCGAAGAATAGCCAAATGGGTCCCACCTGGCCGAACCCTTTACATAGCATCAAATGAGAGAAGACCTGGGTTTTTTTCACCACTTGGTGTCAGGTACAAATTGGCATACTCATCGAACTACAGTAGTATCTTGGATCCGGTGATAGAGAACAACTATCAGCTGTTCATGATAGAGAGACTCATTATGATGGGAGCAAAAACATTCATCAGTACGTTTAAGACTGACGATTCAGAACTCAGCCTAACAGATGATACAAAGAAAAATACTAAGGTATGGGAGAAAGTCGTTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139012.p1 GENE.R_Transcript_139012~~R_Transcript_139012.p1 ORF type:3prime_partial len:397 (+),score=61.47 R_Transcript_139012:252-1439(+)
MANLRNPAKPKSQLATPTLCLALSITGIALLFFFYSFISTTGFSFTSPKLIIPSVSISIKGSNGSYNYDKFLYWGYRIDCPGKHCDTCAGLGHQESSLRCALEEALFLKRTFVMPARMCINPIHNKKAMLQKASNARLDEGWMATSCPMDALYDLELISSKIPIILDNSEMWDHVLSTSMRLGRRGVVHVEGVSRVELKEDIQYANLLLINRTASPLAWFMECKDRKNHSAVLLPHSFLPSMAAKKLREAADKIKAMLGDYDAIHVRRGDILKTRKDRFGMERSRHPHVERDTRPEFILRRIAKWVPPGRTLYIASNERRPGFFSPLGVRYKLAYSSNYSSILDPVIENNYQLFMIERLIMMGAKTFISTFKTDDSELSLTDDTKKNTKVWEKVVR

Click here to download the sequence:
Link to NCBI Protein BLAST