Transcript Information: R_Transcript_139045.p1


Annotated TAIR IDAT5G53730.1
Annotated Gene NameLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21808072-21808713 | Reverse length=213
E-Value4.3E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6161526419726
Replicate 21.6836655994201
Replicate 32.0529623317306
Condition 2: 8 Hour
Replicate 14.0424777035546
Replicate 23.6916550209505
Replicate 34.3666610454705
Condition 3: 24 Hour
Replicate 14.0067871104955
Replicate 22.4968217611974
Replicate 35.2654383916593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139045.p1 GENE.R_Transcript_139045~~R_Transcript_139045.p1 ORF type:complete len:212 (+),score=28.18,LEA_2|PF03168.9|1.1e-10 R_Transcript_139045:68-703(+)
ATGTCTCAAATCCTCACAAAATCACCCAAACACTGCGCCAAGAAAGGGTTTATCAACTTCAACTTCCTCAACAAGAAGCTCTTCAAAATCCTATCAACCCTCATATTCTCCATCCTCTCTTTAATACTGCTCCTTTGGTTCATTCTTCACCCTGCAAAGCCTCAATTCATTCTCCAAGAAGTTGACATTTACCAGCTCAATTTCACATCACCCCAAATCCTTAACTCCTCCATAGAAATCACCTTAGAAGCACGAAACCCGAATCAAAAGGTAGGCATTTACTATGATGAGCTCCAAGCCTATGCCCAATACAAAGGCCAGCAAATAACCATGGACACACAAATTCCTCCATTCTATCAAGAGCAACAGGATAGCAACCTCCTTTCGGCTTCTCTTACTGGGGCTGCTCTCCCAATTGCTCCGTCTACTGGTTATCAAGTGGTTCGAGATCAAGCATCAGGGAAGCTAGTTTTGATCTTCAAGTTGGATGCAAAGATCCGTTGGAAAGTCGCAACATGGGTTTCAGGAAGTTGTAGGTTAAATGTTAACTGTGTTGCTATTATTCCTCTTAGAGCACTTAATCCTACAGGTCCTCTGATTTCAAAGCAGGGGACTCAATGTTCTACCACCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139045.p1 GENE.R_Transcript_139045~~R_Transcript_139045.p1 ORF type:complete len:212 (+),score=28.18,LEA_2|PF03168.9|1.1e-10 R_Transcript_139045:68-703(+)
MSQILTKSPKHCAKKGFINFNFLNKKLFKILSTLIFSILSLILLLWFILHPAKPQFILQEVDIYQLNFTSPQILNSSIEITLEARNPNQKVGIYYDELQAYAQYKGQQITMDTQIPPFYQEQQDSNLLSASLTGAALPIAPSTGYQVVRDQASGKLVLIFKLDAKIRWKVATWVSGSCRLNVNCVAIIPLRALNPTGPLISKQGTQCSTTI*

Click here to download the sequence:
Link to NCBI Protein BLAST