Transcript Information: R_Transcript_139066.p1


Annotated TAIR IDAT4G20900.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)MS5, TDM1
Annotation TypeOrtholog
Chromosome Positionchr4:11184103-11185844 | Reverse length=450
E-Value9.8E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.705553711451
Replicate 21.9286789526453
Replicate 32.5823879544723
Condition 2: 8 Hour
Replicate 11.4824427629856
Replicate 21.2137430644485
Replicate 31.6294765275086
Condition 3: 24 Hour
Replicate 13.1632886785563
Replicate 21.8878196545171
Replicate 33.1529261448767


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139066.p1 GENE.R_Transcript_139066~~R_Transcript_139066.p1 ORF type:complete len:479 (+),score=99.66,TPR_12|PF13424.2|25,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|3.7e-07,TPR_12|PF13424.2|1.1e+02,TPR_2|PF07719.13|2.1e+02,TPR_2|PF07719.13|5.4e-06,TPR_2|PF07719.13|8,TPR_1|PF00515.24|2.9e+02,TPR_1|PF00515.24|1.6e-07,TPR_1|PF00515.24|7.7,TPR_19|PF14559.2|4.7,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|0.5,TPR_19|PF14559.2|1.7e-06,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|2.5e-07,TPR_11|PF13414.2|1.6e+04,TPR_8|PF13181.2|80,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|9.1e-06,TPR_8|PF13181.2|4.8e+02,TPR_7|PF13176.2|7.1e+02,TPR_7|PF13176.2|9.9e+02,TPR_7|PF13176.2|1.4e-06,TPR_7|PF13176.2|1.5e+03 R_Transcript_139066:187-1623(+)
ATGTGGGCCAACGAAAACCACCTGAATTCTCCGGCAACACAAGAGAAGCGCTTCTTCTACACTCCACCTGCTAAATTGAAGTCATGGACACCAAAACCCTGGATGTCAGAAAGAAAACCCACAAGCTCAAATGATCCTTTCCATGTCATTCACAAAGTCCCTGTTGGCGACACTCCTTATGTCAAGGCCAAACGTGTTCAGTTAATTGACAAGGATCCTGGAAAGGCAGTATCACTATTTTGGAGTGCTATAAATTCTGGTGACCGGGTTGATAGCGCCTTGAAAGATATGGCGGTAGTGATGAAGCAATTGAATCGTTCGGATGAGGCAATCGAAGCAGTTAAATCCTTTCGTCATCTCTGCTCCCCAGCTTCCCAAGAATCTCTTGATAACGTATTAGTGGAACTCTACAAGCGGTCTGGTAGGCTAGAAGAGCAAATACAAATTCTTCAGCATAAACTGAAACTGGTTGAAGAAGGCAATGCTTTTGGTGGCAAACGAGTGAAATTGGCAAGATCTCAAGGCAAGAAAGTGCACATTACAGTTGAACAAGAATATGCGAGGCTTTTAGGGAACTTGGCATGGGCATACCTGCAACAAAATGACTACAAAACTGCCGAAGAGTATTATAGGAAAGCCCTGTCAATCGAGATCGACAGAAACAAACAGTGCAATTTGGCTGTATGCCTGATGTACATGAACAGGACAGCTGAAGCGAAATTTCTGCTTCAAGTGATTCGAGATTCAGCTCCTGAAGGGCAGATGGATGAGTCTTATGCCAAGTCCTTTGACCGTGCCTTTCAAATGCTGGCTGAAATGGAGGAGGGACTTCCACCAGGTGTTCAATCTTCATGTCAACAACAAAAGGAGAATCGTCTTGAACAGCCTATCCGAAACCATGTTCTTCCAAAGAGTCCATTGACACAGCCTAGAAGAGACCGAATTTATTACCATAATAATCCAACTAGCCATTCACATCGCAGACTGCAATTTGACAAACCTTTTGGAGGCATAAATATACAAAAGGAGTCTTGTGCAATTCAAGAAGTTCATAACAGGACAATCCCTGAGATTGACAAGAAGAATGCAGAGACAACAGATTACAGTACACAAAATGAAGATGAGCAGGAACAGGATTTGTTGGTCTATGAGAGTAAAAAGAGCTGGGCTGACATGGTTGAGGAAGAAGAACAGGAGTTGATAAATGAACTTGTTACAGGAGAGAATGTGGATTTGAACGTAATAGGGTCATCACAGAATCCTGAGACTCCTGCTGAGAATTTGAGCAGTAAACTCCAACGTTGTAGTCTTATTGATCAGCCATCAGTACGACGGTCTTTGGTTTTTACACAACAACAGAAGGAAGACCCAACAAACTCTAATAAGAGGGTTAGCAGCAGATTGAAGGTTTTCCAAGACATAACTCCTTCTCCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139066.p1 GENE.R_Transcript_139066~~R_Transcript_139066.p1 ORF type:complete len:479 (+),score=99.66,TPR_12|PF13424.2|25,TPR_12|PF13424.2|1.8e+03,TPR_12|PF13424.2|3.7e-07,TPR_12|PF13424.2|1.1e+02,TPR_2|PF07719.13|2.1e+02,TPR_2|PF07719.13|5.4e-06,TPR_2|PF07719.13|8,TPR_1|PF00515.24|2.9e+02,TPR_1|PF00515.24|1.6e-07,TPR_1|PF00515.24|7.7,TPR_19|PF14559.2|4.7,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|0.5,TPR_19|PF14559.2|1.7e-06,TPR_11|PF13414.2|1e+02,TPR_11|PF13414.2|2.5e-07,TPR_11|PF13414.2|1.6e+04,TPR_8|PF13181.2|80,TPR_8|PF13181.2|4.9e+02,TPR_8|PF13181.2|9.1e-06,TPR_8|PF13181.2|4.8e+02,TPR_7|PF13176.2|7.1e+02,TPR_7|PF13176.2|9.9e+02,TPR_7|PF13176.2|1.4e-06,TPR_7|PF13176.2|1.5e+03 R_Transcript_139066:187-1623(+)
MWANENHLNSPATQEKRFFYTPPAKLKSWTPKPWMSERKPTSSNDPFHVIHKVPVGDTPYVKAKRVQLIDKDPGKAVSLFWSAINSGDRVDSALKDMAVVMKQLNRSDEAIEAVKSFRHLCSPASQESLDNVLVELYKRSGRLEEQIQILQHKLKLVEEGNAFGGKRVKLARSQGKKVHITVEQEYARLLGNLAWAYLQQNDYKTAEEYYRKALSIEIDRNKQCNLAVCLMYMNRTAEAKFLLQVIRDSAPEGQMDESYAKSFDRAFQMLAEMEEGLPPGVQSSCQQQKENRLEQPIRNHVLPKSPLTQPRRDRIYYHNNPTSHSHRRLQFDKPFGGINIQKESCAIQEVHNRTIPEIDKKNAETTDYSTQNEDEQEQDLLVYESKKSWADMVEEEEQELINELVTGENVDLNVIGSSQNPETPAENLSSKLQRCSLIDQPSVRRSLVFTQQQKEDPTNSNKRVSSRLKVFQDITPSP*

Click here to download the sequence:
Link to NCBI Protein BLAST