Transcript Information: R_Transcript_13909.p1


Annotated TAIR IDAT4G21890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11611874-11612674 | Reverse length=266
E-Value6E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.245900114282
Replicate 26.4017156087607
Replicate 38.7935817312244
Condition 2: 8 Hour
Replicate 16.3052069295434
Replicate 26.0052921216454
Replicate 38.5453080013828
Condition 3: 24 Hour
Replicate 18.6681136294175
Replicate 27.8743894301271
Replicate 37.5033679574356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13909.p1 GENE.R_Transcript_13909~~R_Transcript_13909.p1 ORF type:complete len:633 (+),score=120.58,zf-MYND|PF01753.14|2.2e-09 R_Transcript_13909:543-2441(+)
ATGGATGTGCATTTGAAGGGTTTGTTTGGTAGGTTTCATGAGCAATTTGGATCTGGGCCAGGACTTGGTCCTGGATCTGGTACTTGTTTGACAAAGATAGAGGGTGTAACATACCCTTTTATTAAGTCACTCTATAGAGCTGCTGCAGCTCTGTACAGGACTGATCCTTGGAAGAGATTGAGACCGGGCCATTTCTTTGGCATTCGAGTTGGTAAAGATTCTGAGTGGTCTGGCAAAAAACAGCCATTCCCTTGTGGCCAATTCATTGGTGGGGATGGTGGGGACGTCGCGTTTTACCTGTTTCGATCGGAGAGTGATGCTAGGAAAGCAACCAGGGCTAGAGAGACTGAGCCTGTACCAAATACTGAGATTATGAGGGTGACTTATGAGAAGGAGTCGTTGATGTTTCCGTCTCATAGGAAAATGATCAAGTCTTTGGGTTTGGAAGTTTCAGGTACTGAATACTTTCCGGTGTTTGATGTGGTATATTGCACTTCGAATGGTGAGTTTAGCTATAGGAATCCAATGTCTGAGGAGCTAAGGTTCGTGTATGCTGCTATGAGAGGTATGTCATTGGTGCACCCCTTGCTCGAAGAAGATGTGAATGCCACACCCAAATGGTCTCAGCTAATGAGTTTCGAGCCATTTATTGAGACGGTTGATGTTCAGTGGCCTTCGGAATTGGCCAAGAGCAATGATATTGTAGCTGTTACAGTTTCTCATCCACCGGGTCAAGTATATGAGGAAAAGACTGTCTCATCAGCACACTCAACCCCTACGAAGTATACAGAGTCAGCTAGAGAAGACAATTTTAGTGACACAAAATTGTTCTCGAATGGAATTTTGAGGCAATGTGCAATGTGTGAGAAGGAATTTCATTCTGAGCAATCTTTTCCTTGCAGCCGTTGTCGTGCAGTAGTTTACTGTGGTCCTAATTGTCAGAGACAGCACTGGAAGGAAACCCATAAAAGCATGTGTGGCCTTTATAAAGCGATGATGGAGAGAGAAGAGGAGCTGTCTATGAAGATATTTTTGTTCCCTTGTTCTGTTGATCAACCTTGTAAGTGGCTTGAATCTCTTGGAAACCATCAGAAAGGGATGTGGAGAAGGAAGTGTAATTGCTATTCTCATTGTGATTTTGGCCTTCTTCCTCTTAAATCTGGGGTCTGGGATTCCTGGGGTGGGCTTGACGGTGAAGAATATCCACACGATGTACCGTTCCCTAGTCATCTGACAGATGGAATCTCAAGTCCTATCCTTCTTTCTGGTTGGTCTGAGTATTACAATCTCCGATCATTGCCTTTGTCCAGCCCTGTGGCCGACATTCTTTCCCATCCATTGACGGTATACTACATACTAACAGCACTGAGCATCAGTTCGAAAAACCTCCTTCTGAAGGGAAAAGAGGTCATAGTGCATTACCTGGGTCCTGAAGGAGAGTTGGACTGGATGCCTGCTTTTGCTGAGATGGGTCATCTGCTCAATGGTATGGGAAATATCCAGATAGTCATGGTAGGACCTGAGGTTCCTACAACTTTGTCCGGAACTACTTCAGGAATAGGAAGCAGAGTGAGGGTAAATCTTGTAAGGGGTATTTACCAAGAGGAAGCTACCTACCTGCCTTCTCCACATGTCGTTGTTGCACTGAACTGTGGATTAGAGAACTACTCAAGTTGGGGTGGAGCTCTTGAGATTATCAAATCCTTGGGAGTTCCTGCATTTTTCACTGATCAATCTGAAATTTCTTGCACAAATGCTAAGCAAGTTCTTCGTTCTGCTGGTTTGCATATCTCACATCCTGTGACTCCAAATCCTTTCCGTTCCCCTGTGAGGAACCATGGACCTTCAACAAACGTGCCTTCTTACAGCAATTGTTTTGTGCTTGGAGTGAATACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13909.p1 GENE.R_Transcript_13909~~R_Transcript_13909.p1 ORF type:complete len:633 (+),score=120.58,zf-MYND|PF01753.14|2.2e-09 R_Transcript_13909:543-2441(+)
MDVHLKGLFGRFHEQFGSGPGLGPGSGTCLTKIEGVTYPFIKSLYRAAAALYRTDPWKRLRPGHFFGIRVGKDSEWSGKKQPFPCGQFIGGDGGDVAFYLFRSESDARKATRARETEPVPNTEIMRVTYEKESLMFPSHRKMIKSLGLEVSGTEYFPVFDVVYCTSNGEFSYRNPMSEELRFVYAAMRGMSLVHPLLEEDVNATPKWSQLMSFEPFIETVDVQWPSELAKSNDIVAVTVSHPPGQVYEEKTVSSAHSTPTKYTESAREDNFSDTKLFSNGILRQCAMCEKEFHSEQSFPCSRCRAVVYCGPNCQRQHWKETHKSMCGLYKAMMEREEELSMKIFLFPCSVDQPCKWLESLGNHQKGMWRRKCNCYSHCDFGLLPLKSGVWDSWGGLDGEEYPHDVPFPSHLTDGISSPILLSGWSEYYNLRSLPLSSPVADILSHPLTVYYILTALSISSKNLLLKGKEVIVHYLGPEGELDWMPAFAEMGHLLNGMGNIQIVMVGPEVPTTLSGTTSGIGSRVRVNLVRGIYQEEATYLPSPHVVVALNCGLENYSSWGGALEIIKSLGVPAFFTDQSEISCTNAKQVLRSAGLHISHPVTPNPFRSPVRNHGPSTNVPSYSNCFVLGVNT*

Click here to download the sequence:
Link to NCBI Protein BLAST