Transcript Information: R_Transcript_139117.p1


Annotated TAIR IDAT5G13310.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4263561-4264989 | Forward length=370
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4208830734032
Replicate 26.482728699963
Replicate 35.4891721428568
Condition 2: 8 Hour
Replicate 17.7858280247001
Replicate 28.3466886135301
Replicate 36.6081900415234
Condition 3: 24 Hour
Replicate 18.8868931204016
Replicate 25.4884054382082
Replicate 37.9683348860133


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139117.p1 GENE.R_Transcript_139117~~R_Transcript_139117.p1 ORF type:5prime_partial len:217 (-),score=42.45 R_Transcript_139117:227-877(-)
TTCTCAGAGAGAGTAAAGAAGACCTTCGGATCTTTATTCGCATCTCTAGAACCTTCTCCAGCTTCTCTGTCAAACCCATTATGGTCACTATCAGGGGTTCAGGCTGAGAAGCGTGAATGGCGGCGTGACAAGGACACCTCTGCTAGAGACTCCAACCCTTGTTCTTCTTCCTTTGATGATTTTCTCTCTCAGGCTCGTAAAGAGTCCCGTAATAATATCAAGAATTACCAAAAGGAGCTCCAGGATGAACTTGATGATGATGATGGGGATAAGGGGCGTGTGAATTTGGAAGATTGGGATGTTCGATCTTCTATTGGTTTGGATTCCACTCTTGACAATGAAGGGCCCAGTCGTTCAATTCAAGTGAAACAAGACCTCTATAACCAGGCCCAGTCGTTTAATTCAAGTGAAACCAGATCTCTGCAACCGCTCGGATTTGTGAATAGAAGTCAAGGTCAAAAACAATCCAAGGAGGAATCAAGTCAAGGGAGAAGTAATGTCGTTGATGTTGACTTAGGTAGAAGTTTGAATGCCGAAATGGGAAGCATAATAAAGCCATTGCCAAAAGCGGTTCATAGTGCGGTTTGTTCTGGGTTTATATTTAGTGACTTGACTTATGTTAGTTTACTTTTCATGATGCTATTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139117.p1 GENE.R_Transcript_139117~~R_Transcript_139117.p1 ORF type:5prime_partial len:217 (-),score=42.45 R_Transcript_139117:227-877(-)
FSERVKKTFGSLFASLEPSPASLSNPLWSLSGVQAEKREWRRDKDTSARDSNPCSSSFDDFLSQARKESRNNIKNYQKELQDELDDDDGDKGRVNLEDWDVRSSIGLDSTLDNEGPSRSIQVKQDLYNQAQSFNSSETRSLQPLGFVNRSQGQKQSKEESSQGRSNVVDVDLGRSLNAEMGSIIKPLPKAVHSAVCSGFIFSDLTYVSLLFMMLFV*

Click here to download the sequence:
Link to NCBI Protein BLAST