Transcript Information: R_Transcript_139163.p1


Annotated TAIR IDAT1G03560.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:890428-892410 | Reverse length=660
E-Value3.6E-303
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4097232216396
Replicate 21.338155716972
Replicate 31.2861142504668
Condition 2: 8 Hour
Replicate 10.92890231211097
Replicate 21.051877597992
Replicate 31.7628271315702
Condition 3: 24 Hour
Replicate 12.5431258385772
Replicate 22.1419371304961
Replicate 32.491013431741


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139163.p1 GENE.R_Transcript_139163~~R_Transcript_139163.p1 ORF type:complete len:659 (+),score=127.75,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|6.5e-17,PPR_2|PF13041.2|6.8e-09,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|34,PPR_1|PF12854.3|50,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|5.8e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.51,PPR|PF01535.16|23,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-09,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.00049,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.37,PPR|PF01535.16|0.35,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|5.3e-05,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.5 R_Transcript_139163:243-2219(+)
ATGAGAAAAACCCTTCTACAAAGATCCCACCCTCTATCCTCCACAATCTTCTTAAAATCCCTCAACAATGACGAATCCTACCATTTTCTCTCAATTCCCACCTTTAAAACTCATTACCATCTTCCATTCCCCCAAACAACCCTTAAACTCAACTGGGTTTCTTCCATTACTACTTCTTCACTTCCCCCACCAGAATGGCTTGAACCCTTCACTGACTTATCCGACGTCGTTTCTCATCCCAATCACCAAAAGCTTCAACCTTCTGTCTGGGTTTCTCGTATCCTTGATCTTCTCCATGATTCACCTAATTTGGAGGCCAATTTGAATGATTTTTGCTCGAAGTTTTTGATTAAATTAACTCCCAATTTTGTTTCTTTTGTTTTGAGCTCAGCCCATTTGAAACCAGATGTTGCCTTTAGGTTCTTTTGTTGGGCTGGTAAGCAAAACAAGTATAAGCATAAATTGGAATGTTATGTTTCTTTGATTGATGTTTTGGGTTTTTCTAGTGATGTGGGTAGGGTTAAGATTGTGTTTGAGCAATTTAAGAAAATGGGTTTTGTTTTGAATGTTAATTGTTCTAATTCTTTGATTAAGAGTTTTGGTAATTTGGGTATGGTTGAGGAGTTGTTATGGGTTTGGAGGAGAATGAACGAGAATGGTATTGAACCTAGTTTGTATACTTATAATTTTTTGATGAATGGGTTGGTGAACTCTATGTTTATTGAATCTGCTGAGCAGGTTTTTGAGGTTATGGAAAATGGGAAAACTCGGCCTGATATCATTACCTATAATACTTTGATTAAAGGGTATTGTAAGGCTGGGAAGATGGTGAAGGCAATGAAGAAGTTTAAGGATATGGAGATTCGAAATGTCGAGCCAGATAAGATTACTTACATGACTTTGATACAAGCATGCTATGGAGAGAATGATTTTGATGCCTGTTTGTCGCTTTATCATGAGATGGTAGAAAAGGGATTGGAAATCCCGTCTCATGCATATAGTTTGGTGATCGGTGGGCTTTGCAAGGATGGGAAGTATGCGCAAGCTTGTGTGGTTTTTGAAGACATGTGTAGGCGGAGGTGCAAGGCTAATGTAGCAATATATACGGCTTTAATTGATTGCCGGGTCAAAAGTGGAAATGTGGAGGCTGCAATTAGTTTGTTTGAGAGGATGAAGAATGAGGGTCTTGCACCCGATGAAGTTACATATGGGGCCATTATCAATGGTTTGAGCAAGAATGGGAGATTGGATGAAGCCATTGATTATTTCAAGGTATGTAGAGATGATGGGGTTAATGTTAATTCGACAATATATTGTTCTCTAATTGATGGCCTAGCGAAGGGAGGGAGAGTTGGGGAAGCGGAAACATTTTTTGAAGAGATGGGAAAGAATGGTTGCACACATGATTCGTATTGCTACAATGTCATGATTGATGCTCTTGCCAAATGTGGGAAAATAGACGAAGCTTTAGCCCTCTTTAATGAGATGGATGCTGAGGGATGTGATCAGACAGTCTATACATACACCATACTCATAGATGGATTGTTTAAGAAACGCAAAAAGGAAGAGGCATTGAAGCTGTGGAATATGATGATTGACAAGGGTATTGCACCAACTTCAGCTTCTTTCAGAGTTCTCTCAATTGGACTTTGTCTTTCGGGTAAGGTTGCTAGGGCTTGCAGGATTTTGGATGAGCTAGCGCCCATGGGAGTTATCCCAGAAAATGCTTTTGAAGATATGATCAATGCATTGTGTAAAGTGGGGCGCATTGAACAGGCTTGCAAATTAGCTGATGGAATTGTCGATAGGGGGAGAGAGATACCTGGAAGAGTTCGTACTATCCTGATCAATTCCCTGAGAAAATCAGGAAATGTTGATTTGGCCATGAAACTGTTGCATAGCAAAATTGGAATTGGCTATGATAGAATGGGAAGCATTAAAAGGCGTGTGAAGTTCAAAAGTCTCCTTGAGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139163.p1 GENE.R_Transcript_139163~~R_Transcript_139163.p1 ORF type:complete len:659 (+),score=127.75,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|6.5e-17,PPR_2|PF13041.2|6.8e-09,PPR_2|PF13041.2|9.4e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.9e-11,PPR_2|PF13041.2|2.2e+02,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|34,PPR_1|PF12854.3|50,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|5.8e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.51,PPR|PF01535.16|23,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-09,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.00049,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|0.37,PPR|PF01535.16|0.35,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|5.3e-05,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.5 R_Transcript_139163:243-2219(+)
MRKTLLQRSHPLSSTIFLKSLNNDESYHFLSIPTFKTHYHLPFPQTTLKLNWVSSITTSSLPPPEWLEPFTDLSDVVSHPNHQKLQPSVWVSRILDLLHDSPNLEANLNDFCSKFLIKLTPNFVSFVLSSAHLKPDVAFRFFCWAGKQNKYKHKLECYVSLIDVLGFSSDVGRVKIVFEQFKKMGFVLNVNCSNSLIKSFGNLGMVEELLWVWRRMNENGIEPSLYTYNFLMNGLVNSMFIESAEQVFEVMENGKTRPDIITYNTLIKGYCKAGKMVKAMKKFKDMEIRNVEPDKITYMTLIQACYGENDFDACLSLYHEMVEKGLEIPSHAYSLVIGGLCKDGKYAQACVVFEDMCRRRCKANVAIYTALIDCRVKSGNVEAAISLFERMKNEGLAPDEVTYGAIINGLSKNGRLDEAIDYFKVCRDDGVNVNSTIYCSLIDGLAKGGRVGEAETFFEEMGKNGCTHDSYCYNVMIDALAKCGKIDEALALFNEMDAEGCDQTVYTYTILIDGLFKKRKKEEALKLWNMMIDKGIAPTSASFRVLSIGLCLSGKVARACRILDELAPMGVIPENAFEDMINALCKVGRIEQACKLADGIVDRGREIPGRVRTILINSLRKSGNVDLAMKLLHSKIGIGYDRMGSIKRRVKFKSLLES*

Click here to download the sequence:
Link to NCBI Protein BLAST