Transcript Information: R_Transcript_13917.p1


Annotated TAIR IDAT1G20200.1
Annotated Gene NamePAM domain (PCI/PINT associated module) protein
Annotated Gene Symbol(s)EMB2719, HAP15
Annotation TypeOrtholog
Chromosome Positionchr1:7001409-7004154 | Reverse length=488
E-Value2.5E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 178.760220070463
Replicate 272.950336211228
Replicate 377.198984782125
Condition 2: 8 Hour
Replicate 165.145419828969
Replicate 283.819011073401
Replicate 398.107785009576
Condition 3: 24 Hour
Replicate 190.93920777109
Replicate 291.693949538944
Replicate 386.56609583734


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13917.p1 GENE.R_Transcript_13917~~R_Transcript_13917.p1 ORF type:complete len:489 (+),score=112.48,Rpn3_C|PF08375.7|1.8e-27,PCI|PF01399.23|4.5e+03,PCI|PF01399.23|8.6e-23 R_Transcript_13917:179-1645(+)
ATGACGCAAGACGTGGAGATGAAGGAAACTCAACTTCCTTCCAATTCTCTCTCCTCGACCGATCCACACACCACTCTCAAGCATTTGAAGGAAATAGCGGCTCTAATGGAGACAGGCTCGTACACGAAGGAAAGTCGTCGAATTTCTCGAGCGATTCGACTCACCTTTGGGGTTCGCCGTAAGCTTACGTCTCGTGTTCTGTTGTTTTTCCTTGATCATGCTCTTGCTCCATCTTCTGAGGCTCATTCCAAGTTGTCTGCTTTTCTTCCTAAGGGAGGTGAGCATGAGATGGAAGTTGACACTGCAACATCTGCTTTGCAATCTCCAGTGAAAAGCACATTGCCAGAGCTGGAAATTTATTGCTACTGGCTTGTGTTATTGTTCCTGATTGATCAGAAAATGTATAATGAGGCAAAAGCTTGTGCTTCTGCAAGCATTGCCCGTTTGAAGTCCTTGAAGAGGAGGATCGCTGATGTTTTAGCGTCCAAATTGTATTCGTTCTATTCATTGAGTTATGAGCTTACTGGGGATCTTGCTGAAATTCGGGGTGAACTCCTTGTCTTGCACCGGTTGGCGACATTGCACCATGATGAGCTTGGTCAGGAAACACTTCTAAACCTGCTTCTCCGAAACTACCTACATTACAATTTGTATGATTTGGCTGAGAAGCTGAGATCGAAGGCACCAAGCTTTGGGGCCCACTCAAATCAGCAGCATTGTCGGTATCTCTACTATGTTGGAAAGATCCAGACAATTCAATTGGAATATACAGATGCGAAGGAAAGCCTTCTTCAGGCTGCTAGGAAAGCCCCTGTTGCAGCTCGTGGTTTTAGGATTCAGTGCAACAAATGGGCTGTGATAGTGCGATTATTGTTGGGTGAAATACCCGAGAGAACTATTTTTATGCAGAAAGGCATGGAGAAGGCGTTGCGACCTTACTTTGAGCTTACAAATGCTGTTCGTATTGGTGACTTGGATCTGTTCAGAAAGGTTACTGAAAAGTTCTCGGATACTTTCAATAAAGATGGGACTCATAATTTGATTGTCCGTCTGAGGCACAATGTCATCAGAACCGGATTGAGAAACATCAGTATCTCTTATTCCCGCATCTCACTTGCTGATGTTGCTAAGAAGCTGAGATTGGATTCGCCCAACCCTGTTGCTGATGCTGAGAGCATTGTGGCCAAGGCTATTCGGGATGGTGCAATAGACGCTACATTAGATCATGGAAATGGATGGATGCTGTCTAAGGAGACAGGTGACATCTACTCAACAACTGAACCACAGTCTGCCTTTGACTCTAGAATTGCATTCTGTCTTAACATGCACAATGAAGCTGTACGGGCACTGCGTTACCCTCCAAACTCACACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGGAAAGGCAACAACAGGAGCAAGAACTTGCCAAGCATATTGCTGAGGAGGAGGAGGATGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13917.p1 GENE.R_Transcript_13917~~R_Transcript_13917.p1 ORF type:complete len:489 (+),score=112.48,Rpn3_C|PF08375.7|1.8e-27,PCI|PF01399.23|4.5e+03,PCI|PF01399.23|8.6e-23 R_Transcript_13917:179-1645(+)
MTQDVEMKETQLPSNSLSSTDPHTTLKHLKEIAALMETGSYTKESRRISRAIRLTFGVRRKLTSRVLLFFLDHALAPSSEAHSKLSAFLPKGGEHEMEVDTATSALQSPVKSTLPELEIYCYWLVLLFLIDQKMYNEAKACASASIARLKSLKRRIADVLASKLYSFYSLSYELTGDLAEIRGELLVLHRLATLHHDELGQETLLNLLLRNYLHYNLYDLAEKLRSKAPSFGAHSNQQHCRYLYYVGKIQTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTIFMQKGMEKALRPYFELTNAVRIGDLDLFRKVTEKFSDTFNKDGTHNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSPNPVADAESIVAKAIRDGAIDATLDHGNGWMLSKETGDIYSTTEPQSAFDSRIAFCLNMHNEAVRALRYPPNSHKEKESAEKRRERQQQEQELAKHIAEEEEDDF*

Click here to download the sequence:
Link to NCBI Protein BLAST