Transcript Information: R_Transcript_139182.p1


Annotated TAIR IDAT3G17930.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6142307-6143246 | Reverse length=190
E-Value2.5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.764993718272
Replicate 228.688014430189
Replicate 321.545941303312
Condition 2: 8 Hour
Replicate 124.243430640837
Replicate 221.696697232042
Replicate 318.600907912971
Condition 3: 24 Hour
Replicate 126.253730047523
Replicate 223.802210089831
Replicate 323.94644918715


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139182.p1 GENE.R_Transcript_139182~~R_Transcript_139182.p1 ORF type:3prime_partial len:202 (+),score=49.86,DUF3007|PF11460.4|1.9e-33 R_Transcript_139182:14-616(+)
ATGGTGGGTGCAATTGCTAATCTTCATCAGGAGAATTTTGATTGCAAAAGTATCAGCTTCAGGGGAGGGGGAGCTCTTTCTCCATTTGCTTCTGCTCATTCTTTGCAGAACTCTTTCTTAAGAGTTGGAAGTACTTCTCAAACATGGGGCAAGAAGGAAACCGTTCCTGTTAAGATAGGGTCCAATCAGAAGCTGTTGAGAGTTGGTTTTGTGATTCCAAGAAGCAGTGGTTCCTCAAGCTCCAATGATACTGTAGACCAGTCCTCTAGCCAAGAGAAGGCACCTTTTGGATACACTAGGAAGGATGTGCTGTTGATTGGGTTAGGAGTGACTCTTTTTGGAGTGGCCTTGAAAAATGGATTGGAGTTTGTTGGAGTTGATCCCTTACAAGCAGGGAATGTTGTTCAGTTGGTAATAGTCTTAGGCATGACTGTTGGATGGATCTCAACATATATGTTCAGGGTTGCAAGCAAAGACATGACATACGCCAAGCAGTTACGGGACTATGAGAGCAAAGTTATGGAGAAACGGTTGGAGGGTCTTACGGAAGCAGAATTGCAAGTATTACTTGAACAAGTTGAGGAAGAAAAAAGACGTCTCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139182.p1 GENE.R_Transcript_139182~~R_Transcript_139182.p1 ORF type:3prime_partial len:202 (+),score=49.86,DUF3007|PF11460.4|1.9e-33 R_Transcript_139182:14-616(+)
MVGAIANLHQENFDCKSISFRGGGALSPFASAHSLQNSFLRVGSTSQTWGKKETVPVKIGSNQKLLRVGFVIPRSSGSSSSNDTVDQSSSQEKAPFGYTRKDVLLIGLGVTLFGVALKNGLEFVGVDPLQAGNVVQLVIVLGMTVGWISTYMFRVASKDMTYAKQLRDYESKVMEKRLEGLTEAELQVLLEQVEEEKRRLN

Click here to download the sequence:
Link to NCBI Protein BLAST