Transcript Information: R_Transcript_139204.p1


Annotated TAIR IDAT5G27990.1
Annotated Gene NamePre-rRNA-processing protein TSR2, conserved region
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10017358-10018265 | Forward length=184
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5710659436988
Replicate 28.3985201665192
Replicate 38.3991371185892
Condition 2: 8 Hour
Replicate 17.3457594841736
Replicate 25.3666116418845
Replicate 35.3244724486469
Condition 3: 24 Hour
Replicate 15.8159778310184
Replicate 25.8814023708206
Replicate 37.7336556560371


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139204.p1 GENE.R_Transcript_139204~~R_Transcript_139204.p1 ORF type:complete len:150 (+),score=48.19,WGG|PF10273.5|1.2e-14 R_Transcript_139204:278-727(+)
ATGGAGCTTCCAAACAAGCATTTGACAGAAGAAGGCTGCGAACAATTACAAGAAGGAATATCATTAGTGTTTTCAAAATGGTGGGCACTTCAAATGGCCATTCAAAATGAATGGAGTGGTCCTCATTCTCGTGGGAAAGCTCTCGATTTTGCCTGTCGTGTTTTCAATTTTTTCTACAACCCTAATCGTAAAGAAGACTTGCTTGATGAAGGCATGACTTCCTTCAATGCCACTGTAGATGATGGCAGCGTTGAAGAGGTGGCAGAGCAGTTGATGATTATGCATGAAGAGTGTTTAGAAGGCAACTACCTATCAATTCAAAAGCTAAGGGAAGTGAAATCTATGCCTGGTCCATTTGTGAGGAAGGCTGAAAATGAGAGTGATGAGGACGAGGATGAGGAGGATGGAAAACAAGGGGATGATGCTGCCACAAAGATGAGAGGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139204.p1 GENE.R_Transcript_139204~~R_Transcript_139204.p1 ORF type:complete len:150 (+),score=48.19,WGG|PF10273.5|1.2e-14 R_Transcript_139204:278-727(+)
MELPNKHLTEEGCEQLQEGISLVFSKWWALQMAIQNEWSGPHSRGKALDFACRVFNFFYNPNRKEDLLDEGMTSFNATVDDGSVEEVAEQLMIMHEECLEGNYLSIQKLREVKSMPGPFVRKAENESDEDEDEEDGKQGDDAATKMRGA*

Click here to download the sequence:
Link to NCBI Protein BLAST