Transcript Information: R_Transcript_13926.p1


Annotated TAIR IDAT2G31970.1
Annotated Gene NameDNA repair-recombination protein (RAD50)
Annotated Gene Symbol(s)RAD50, ATRAD50
Annotation TypeOrtholog
Chromosome Positionchr2:13600657-13608815 | Forward length=1316
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0822042884292
Replicate 24.033457862812
Replicate 35.4962255735643
Condition 2: 8 Hour
Replicate 14.6108538397242
Replicate 24.635171406715
Replicate 36.5329259180436
Condition 3: 24 Hour
Replicate 17.0424860440338
Replicate 24.9402440187702
Replicate 36.365217080548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_13926.p1 GENE.R_Transcript_13926~~R_Transcript_13926.p1 ORF type:complete len:1317 (+),score=284.88,AAA_23|PF13476.2|1.3e-33,AAA_23|PF13476.2|1.6e+04,AAA_23|PF13476.2|1.6e+04,AAA_15|PF13175.2|5.6e-07,AAA_15|PF13175.2|1.6e+04,AAA_15|PF13175.2|4.9e+03,AAA_15|PF13175.2|2.4,SMC_N|PF02463.15|2e-06,SMC_N|PF02463.15|1.6e+04 R_Transcript_13926:144-4094(+)
ATGAGCACGGTAGACAAGATGCTTATCAAAGGAATCCGGAGCTTCGACCCGGAAAACAAAAACGTCATCACTTTCTTCCGGCCCTTAACCTTAATCGTCGGCGCTAACGGTGCCGGAAAAACTACTATAATTGAGTGCTTGAAGCTTTCCTGTACTGGAGAGTTGCCTCCTAATGCTAGGTCTGGTCAGAGCTTTATTCATGACCCTAAGGTTGCAGGAGAAACGGAGACAAAGGCTCAAATTAAGCTTAGGTTCAAGACCGCAGCAGGGAAAGATGTGGTGTGCATACGTTCGTTTCAGTTAACTCAGAAGGCGTCCAAGATGGAGTACAAAGCTATTGAAAGTGTGCTTCAGACTATTAATCCTAATACTGGAGAGAAAGTCTGCCTTAGTTATAGATGTGCCGATATGGACCGAGAAATCCCTGCACTTATGGGTGTTTCTAAAGCTATCTTGGAGAATGTCATATTTGTGCACCAAGATGAGGCAAACTGGCCATTGCAGGATCCATCCACACTGAAAAAGAAATTCGATGATATCTTCTCTGCCACACGGTACACCAAGGCTTTGGAGGTTATCAAGAAGCTTCATAAGGAGCAGGCACAAGAAATTAAGACATACAAGTTGAAGTTGGAGCATCTGCAAACATTAAAAGATTCTGCGTATAAGCTTCGAGAAAGTAGTGCTCAAGATCAGGAAAGGGCAGAATCCCTGAAAAATCAAATGCAGGAACTGGAAAGGGATACTCAAGATGTTGATGCCAAGATACATCACTTTGAACTCAAGCAAAAAGAACTACTTAAGTTGCAGGACCAGATAACGGAGAAGAGCGCTACAAGAAGCACTCTGCGTTCGGTGCAGGAAGAAAAACATTTAGCACTTGTGGAAGAAGTCGATGACACTGATGAAGAGCTCATGGAATGGAAAGTAAAGTTTGATGAGAAAATTGCTCTACAGGATTCTCAAATTAGCAAATTGGAAAGAGAAAAGGCGGACCTGGAGGAAACATGTAAGCTAGTTGGTCATAAAATAAGTGAGTATATAGCGGATATAAGCAAGCTTCAAGCCGAAGCAGAGGCTCATGTTTCACTGAAGAATGAAAGGAGCGCCATAATCCAAAAGCTCTTTGATAAGCATAATATGGGTCCTCTTCCAAATGGTCCATTAAGTGATGAAATGGCTTTGAGTTGTACAAGTAGTTTAAATGCAAGGAAGTTGAATATAGAAAAGGATTTACTGGAAAAGAAGAAATCAAATGAAACTGAAATCAGCACAGCATGGGACTGCTATAAGAGTGCTGATAGTCGCCGGAAGGATCTTGAAGCACAATTACGAGCCAGAGCAGAGATGAAGGACGGTATTTTGAAGCGCATCAGAGAGAAGGAGAGTGATCGTGACTCTTACGAAAGTAAAATTTCAGATATCGACCTCTCTCGTATAGATGAAAGAGAGAGGAGTGTGCGCCTTGATGTGGAAAGGAAGACAAACCAGCTTGCTCAAAGAGATTTTGAATCGAATATACGCCAAAAGCAAAGTGAGATTTACATCATCAAACAGAAGATTAAATCTTTGAATCGCGAAAAAGATGTCTTGGCCAGTGATTCTGAGGATAGAGTGAAGCTATCTTTGAAAAAACCAGAGTTAGAGAATAACAGAAAGAAGTTAAAGAGAATAATGGACGAAAACAAGGATAAGATAAGGATAGTTCTAAAAGGGAGACTCCCTCCGGAAAAGGATTTGAAAGAGAAAATTAAACAAGCTTTAAGTGCTACAGTTGATGAATTTAATGACCTTAAGTCCAAGTCTTATGAAGCTGAAAAAGAAGTAGATGTGTTACAGATGAAAATCAAGGATGTCAGCAACAATTTAAACAAACAGCAGAAAGATATGGATTCTGCGAAGAGGATCATTGAATCTAAACTTCAATCATTGAATCAGCAGTCCTTTGACATTGATTCCTATTGTGAAGCCTTATATAAGGCGAAAGAGAATGCAAATCACCTCAAAAGTTTATTCATTTCGTCAGATGGTCTCATCAAGATGATAGGCCCTTATGTAGATATTGCTCGACGTGGTCATTATTGTCCTGTCTGTGAACGTCCGTTTTCTGCCGAAGAAGAGGATGAGTTTGTCAGCAAGCAAAGAGTCGACACCGCCGATCATGGACAGAAATTGAAAACATTAGCTGCAGAATTCTCAGCTGCTGACTTGGTATTTCAAGAGCTGGACTCACTTCGGATGATGTATGAAACCTATGTTAAAATCAGCAAAGAGGGGATCCCTCAAGCAGAGAAAGAATTAGTTGATCTGAATGAAGAGCTGGAGCAGAAGACACAAGCACTCGATGATATTTTAGGTATTGTTGCACAAGTGAAGGCTGACAAGGATTCTATTGAAGCCTTGGTGCAGCCTGTGGAGACAGCAGACAGGCTTTTTCAAGAGATACAGAACTTGCAAGAGCTAGTTGAGAAGTTGGAGTATAAACTTGACTTTCGAGGTCAGGGTGTTAGATCTATGGAGGAAATTCAGTCAGAGCTTAATACACTGCAGAGCACAACGGATAGTTTGCAACATGATATTGAGACATTAACAGAGGAACGAAGAAATATCGAGACTGATTTGTCTAGCAAACAGATGCTTTGGCATTCTATCCGGGAGGAGAAATTGCAAACAGTTCATAACTTGGAGCTTTTAAAAAAACTGGAAGAGGAACTTGAGCGTTTAGAGGATGAGAGAACTCAAATAGAGCTGGAGCAGAAGCAACTCGCTGAGACTCTTGGTCCCTTAACCAGGGAAACGGATAAACATTTAAGTGCTTACAAAGCTTTGAAAGAAAGACTTGATCGTGAATTTGAGCAGCTGGCTGAAACAAGAAGAATTTACATACAGGATTTTCACGAACTGCTCAATCTTAACACCAAGATAAAGGGTTATGATGAGTTGAAGAAAGCAGAGCGCTTGAATGACCTCAAAGCGAGGAAGTCTCTGTCCGAATCTCAGCTTCTGAACTCTGAGCAAAGGAAGAAGGAAATCTCCATTGAACTGGAAAAAAACAATAATAACAAGCAGAATTGTGACAATATCAGGCGTAATATTAAAGACAATATAGAATATAGGAGAACAAGAGCACAAGTAGTTCAACTTACTGAGGAGCTCGAGTCATTAGAACAGAGACGAGTAGAGATTGGTAGTGGAAAGATAATTGAGTCCGAGTTATTGAAGCTAAATCAGGAAAGAGACACGCTGCTGTCAGAGTTGAACAGGTGTCGTGGAACAATGTCTGTGTATGAGAGCAATATATCAAAGAACAAGATCGAACTTAAACAGCCACAATACAAGGACATAGACAAACGCTACTTCGATCAACTAATCCAGCTCAAGACTACAGAAATGGCGAACAAAGACCTTGATAGATACTACAACGCTCTTGACAAAGCACTTATGCGTTTTCACACTATGAAGATGGAGGAAATAAACAAGATTATTCGGGAGCTCTGGCAACAAACTTATCGAGGGCAGGACATAGATTACATATACATACACTCAGATTCTGAAAGTGCTGGAACAAGATCTTACAGCTACAAGTTGCTAATGCAGACCGGTGATACAGAGCTAGAAATGCGCGGACGGTGTAGTGCTGGGCAGAAGGTTCTCGCTTCACTTGTCATCCGGTTGGCTTTAGCCGAAACTTTCTGTCTCAACTGTGGAATATTAGCACTTGATGAACCGACAACCAACTTGGATGGCCCTAATTCTGAGAGCTTGGCTGCTGCTCTTTTAAGAATCATGGAGGACAGAAAGGGCCAGGAAAATTTTCAGCTCATTGTCATTACTCATGATGAACGGTTTGCTCAACTGATTGGTCAACGGCAACATGCAGAGAAATATTACCGAGTCTATAAAGATGAGCATCAGCATAGCATAATCTCAGCTCAAGAGATCTTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_13926.p1 GENE.R_Transcript_13926~~R_Transcript_13926.p1 ORF type:complete len:1317 (+),score=284.88,AAA_23|PF13476.2|1.3e-33,AAA_23|PF13476.2|1.6e+04,AAA_23|PF13476.2|1.6e+04,AAA_15|PF13175.2|5.6e-07,AAA_15|PF13175.2|1.6e+04,AAA_15|PF13175.2|4.9e+03,AAA_15|PF13175.2|2.4,SMC_N|PF02463.15|2e-06,SMC_N|PF02463.15|1.6e+04 R_Transcript_13926:144-4094(+)
MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGANGAGKTTIIECLKLSCTGELPPNARSGQSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTINPNTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKEQAQEIKTYKLKLEHLQTLKDSAYKLRESSAQDQERAESLKNQMQELERDTQDVDAKIHHFELKQKELLKLQDQITEKSATRSTLRSVQEEKHLALVEEVDDTDEELMEWKVKFDEKIALQDSQISKLEREKADLEETCKLVGHKISEYIADISKLQAEAEAHVSLKNERSAIIQKLFDKHNMGPLPNGPLSDEMALSCTSSLNARKLNIEKDLLEKKKSNETEISTAWDCYKSADSRRKDLEAQLRARAEMKDGILKRIREKESDRDSYESKISDIDLSRIDERERSVRLDVERKTNQLAQRDFESNIRQKQSEIYIIKQKIKSLNREKDVLASDSEDRVKLSLKKPELENNRKKLKRIMDENKDKIRIVLKGRLPPEKDLKEKIKQALSATVDEFNDLKSKSYEAEKEVDVLQMKIKDVSNNLNKQQKDMDSAKRIIESKLQSLNQQSFDIDSYCEALYKAKENANHLKSLFISSDGLIKMIGPYVDIARRGHYCPVCERPFSAEEEDEFVSKQRVDTADHGQKLKTLAAEFSAADLVFQELDSLRMMYETYVKISKEGIPQAEKELVDLNEELEQKTQALDDILGIVAQVKADKDSIEALVQPVETADRLFQEIQNLQELVEKLEYKLDFRGQGVRSMEEIQSELNTLQSTTDSLQHDIETLTEERRNIETDLSSKQMLWHSIREEKLQTVHNLELLKKLEEELERLEDERTQIELEQKQLAETLGPLTRETDKHLSAYKALKERLDREFEQLAETRRIYIQDFHELLNLNTKIKGYDELKKAERLNDLKARKSLSESQLLNSEQRKKEISIELEKNNNNKQNCDNIRRNIKDNIEYRRTRAQVVQLTEELESLEQRRVEIGSGKIIESELLKLNQERDTLLSELNRCRGTMSVYESNISKNKIELKQPQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIYIHSDSESAGTRSYSYKLLMQTGDTELEMRGRCSAGQKVLASLVIRLALAETFCLNCGILALDEPTTNLDGPNSESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVYKDEHQHSIISAQEIFD*

Click here to download the sequence:
Link to NCBI Protein BLAST