Transcript Information: R_Transcript_139294.p1


Annotated TAIR IDAT5G14460.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4660239-4662543 | Reverse length=540
E-Value2.3E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5346524871223
Replicate 27.9346484131359
Replicate 37.458007589445
Condition 2: 8 Hour
Replicate 14.4131500777012
Replicate 26.3702512221982
Replicate 35.3821636141845
Condition 3: 24 Hour
Replicate 17.6081105347624
Replicate 28.7195209567399
Replicate 39.798565470297


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139294.p1 GENE.R_Transcript_139294~~R_Transcript_139294.p1 ORF type:complete len:172 (-),score=25.98,TruB_N|PF01509.14|6.3e-28,TruB_C_2|PF16198.1|2.5e-09 R_Transcript_139294:208-723(-)
ATGATTAAGGGTTACAGTGGAGTCTTCCGTTTGGGGGAGGCTACTTCAACGTGGGATGCAGATTCACTGGTCTGTTTGATGTTCCTTGGTACTGACTATGGAGTAATTCAACGTGAACCATGGGAACACATTAAGGATGAGGACATAAAGAAGACTGCTGCATCGTTTACTGGAGAAATATGGCAAGTTCCTCCAATGTTTTCTGCAATCAAAATTGGTGGTGAAAGAATGTATGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCCAGACGTATATCAATATTTCAGTTCGATATAGAGCGCAGTTTAGAAGACAGGCAAAACTTAATTTTCCGGGTTACCTGTTCCAAAGGTACATACATTCGGTCCCTCTGTGCCGACTTTGGGAGAGCACTTGAAAGTTGTGCGCATTTAACTGCGTTGCGGAGAGATTCAATTGGGGAATATACTGCTGAAGATGCATATGATTTTCAAGAATTAGAGGAGCAAATCACAAAAAGCTATTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139294.p1 GENE.R_Transcript_139294~~R_Transcript_139294.p1 ORF type:complete len:172 (-),score=25.98,TruB_N|PF01509.14|6.3e-28,TruB_C_2|PF16198.1|2.5e-09 R_Transcript_139294:208-723(-)
MIKGYSGVFRLGEATSTWDADSLVCLMFLGTDYGVIQREPWEHIKDEDIKKTAASFTGEIWQVPPMFSAIKIGGERMYEKARRGESIELSPRRISIFQFDIERSLEDRQNLIFRVTCSKGTYIRSLCADFGRALESCAHLTALRRDSIGEYTAEDAYDFQELEEQITKSYF*

Click here to download the sequence:
Link to NCBI Protein BLAST