Transcript Information: R_Transcript_139295.p1


Annotated TAIR IDAT5G14460.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4660239-4662543 | Reverse length=540
E-Value6.8E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3853114293892
Replicate 25.0821433869838
Replicate 35.7064487651192
Condition 2: 8 Hour
Replicate 15.0615657223104
Replicate 25.0173710138349
Replicate 36.2536467685079
Condition 3: 24 Hour
Replicate 18.8018448205155
Replicate 25.845033274888
Replicate 35.916641019603


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139295.p1 GENE.R_Transcript_139295~~R_Transcript_139295.p1 ORF type:5prime_partial len:566 (+),score=116.80,TruB_N|PF01509.14|1.6e+04,TruB_N|PF01509.14|9.3e-53 R_Transcript_139295:2-1699(+)
GAAATTGTTCTGGATTCGCCCAGGATGGTAATGGTGGTTGCTGCTGCTGCTAAAACCTCTCTTTCCCACTTTTCTTTCCTCTTCCTTCGCTCAAAGCACCGGACTCTTTCCTCTTTCTCTTGTCCATCCAAAACATGTCTGCCCTTTGTTCTCCAAACCAAATCCTTCTCCAACCCAGCAACGCCGTGCCCTCTTCAATACGATATGATTATCTCCCGCCCTTCCACCTCTCAAAAGAAACCTCGCCGAGTATCCCCTTCTACCGCAAAGCCTAACGACTTCTCTGAGTCTGATTCTCCCGAGTCAAACCCATCAGAAGAGTTCTCCCAAGATCTGAGCTTTGAGGATTGGGTTGATACAAGATTGTTTGAAAATGGAAGGAACAAGAGTGATAATGTTGATTTGGTGGGAATGGATAAGTCCAAGAGGAAGTATTACAATAAGAGGAGGAAGAGGATGTATGGTTCTGATTCTGAGGATGAGATGAGAAGAAGAGAAAAAGAAGGGTTTGTTGAGTTAAAGCCTGAGGTGGTTGAGCTAAGAACATTGCATAAAAGGGAAGAGGAATTGTATTTTTATGATACATTTGCTATGCCTTGGGAGAAGGATAAACATTATAAGATGGTGTATCAGCTGGAGAAGAAGTATTTTCCTGACCAGTGTTTAGATAAGGCCTTTCTTGAACCCGGGCAATCGAATTTGAGTGACAGAGTTGTTGTGAAGGGGAAGAAGGACAAGAAGGCGGGTAGTCGGAGTGATAAGAGTGAAAAGACTGAGGAGGAGGATAAAGGTTTGGTCTTTTTTGAACAGAAAAAAGATGATGGGTTAGCAAAGGATGATGATGGTTCTAAGGACATATCAGAAAAGAAAGTGGAGGAGTTCTTTAAGTGTTTGAAGAAAGTCCCTAGTAAGAATGGTGAGGTTAGTTGTACTTTGGAGCCTTTTCTTGCTTCTAGAAGTACCGGGTTACCATCCCAGTGGGATACACCTGCTGGAACTGTGATTTTAGTGAACAAGCCTAAAGGTTGGACTTCATTCACAGTTTGTGGCAAGTTGCGTCGCTTGACTAAAGTAAAAAAGGTAGGTCATGCTGGGACTCTCGATCCTATGGCAACTGGATTGTTGATTGTTTGTGTTGGTAAAGCTACTAAGTCGGTGGACAGATACCAGGGTATGATTAAGGGTTACAGTGGAGTCTTCCGTTTGGGGGAGGCTACTTCAACGTGGGATGCAGATTCACTGGTAATTCAACGTGAACCATGGGAACACATTAAGGATGAGGACATAAAGAAGACTGCTGCATCGTTTACTGGAGAAATATGGCAAGTTCCTCCAATGTTTTCTGCAATCAAAATTGGTGGTGAAAGAATGTATGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCCAGACGTATATCAATATTTCAGTTCGATATAGAGCGCAGTTTAGAAGACAGGCAAAACTTAATTTTCCGGGTTACCTGTTCCAAAGGTACATACATTCAGTCCCTCTGTGCAGACTTTGGGAGAGCACTTGAAAGTTGTGCGCATTTAACTGCGTTGCGGAGAGATTCAATTGAAAGCTATGGAAAAGAGAGGACGACCATGAAAACATATTCCACAACCAAATTCGTCAGGGCAAGAGCAATCGAATGCACCTGTTTTTCGGGCTATGGTGACAGAGCAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139295.p1 GENE.R_Transcript_139295~~R_Transcript_139295.p1 ORF type:5prime_partial len:566 (+),score=116.80,TruB_N|PF01509.14|1.6e+04,TruB_N|PF01509.14|9.3e-53 R_Transcript_139295:2-1699(+)
EIVLDSPRMVMVVAAAAKTSLSHFSFLFLRSKHRTLSSFSCPSKTCLPFVLQTKSFSNPATPCPLQYDMIISRPSTSQKKPRRVSPSTAKPNDFSESDSPESNPSEEFSQDLSFEDWVDTRLFENGRNKSDNVDLVGMDKSKRKYYNKRRKRMYGSDSEDEMRRREKEGFVELKPEVVELRTLHKREEELYFYDTFAMPWEKDKHYKMVYQLEKKYFPDQCLDKAFLEPGQSNLSDRVVVKGKKDKKAGSRSDKSEKTEEEDKGLVFFEQKKDDGLAKDDDGSKDISEKKVEEFFKCLKKVPSKNGEVSCTLEPFLASRSTGLPSQWDTPAGTVILVNKPKGWTSFTVCGKLRRLTKVKKVGHAGTLDPMATGLLIVCVGKATKSVDRYQGMIKGYSGVFRLGEATSTWDADSLVIQREPWEHIKDEDIKKTAASFTGEIWQVPPMFSAIKIGGERMYEKARRGESIELSPRRISIFQFDIERSLEDRQNLIFRVTCSKGTYIQSLCADFGRALESCAHLTALRRDSIESYGKERTTMKTYSTTKFVRARAIECTCFSGYGDRAT*

Click here to download the sequence:
Link to NCBI Protein BLAST