Transcript Information: R_Transcript_139310.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2.3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47369275834045
Replicate 20.54488668900427
Replicate 30.39631033903378
Condition 2: 8 Hour
Replicate 10.88962485102448
Replicate 20.92847952281739
Replicate 30.84791260683469
Condition 3: 24 Hour
Replicate 10.31775511733847
Replicate 20.34342098618546
Replicate 30.30294400950723


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139310.p1 GENE.R_Transcript_139310~~R_Transcript_139310.p1 ORF type:5prime_partial len:578 (+),score=85.00,RVT_3|PF13456.2|1.7e-18,zf-RVT|PF13966.2|4.6e-17,zf-RVT|PF13966.2|3.6e+02,zf-RVT|PF13966.2|1.5e+04 R_Transcript_139310:1-1734(+)
ACCTCAACCATTCCCAATCATGTCATGCAAACGACCCACTTGCCTGCCACAATATGCAAAGAACTTGACAGGAAAAATAGGGACTTCCTATGGGGGGATACAATCAACAAGAAAAGGATGCATCTAATTAATTGGGACCAAATCTGTCGCCCAAAGAATCTTGGTGGACTATGGACCAGATCGGCCAGACAAACCAACATCTCATTGCTCTCCAAACTTGGCTGGCGGTTGCTTAAGGAGCCCGATGCTCCTTGGGCATGCGTTCTCAAGGCAAAATATGCTTATGGGAGGCAGGGGATGGATGTCTTCAAAAGCCATCCTGGAGCTTCACATCTTTGGAGGGGCATGACGAAATGCCTACCTGTGCTCCAGCAGGGGGTTGGATGGAACATAGCCAATGGCCAGTCTACTCGCTTTTGGACTGACTGTTGGCTAGGTCCTGAGCCACTCCTCTCCCAAGCTACTTGCAACATTGCTGATCATGAGCAACTTCGCTCAGTAGTTGATTATTGGGACGTGGATCATGGCTGGAAATGGGAAGAAATTGGAGGTAAAGTGCCTGCCCTCACACTGTTGAGGCTTGCTGCTGTTCACGTTAAAACTGAAGGAGCGCATCAGGATACTCTAGTCTGGCTTCGTAGTACATCAGGCGTATTCTCCACCTCCTCAGCCTATGATCTAATAAGGTCCAAAGACAAGGATATTGTTGATAAAATTTGGCAAGCTATTTGGTCAGTCTCAAGCCCAGAGAAATTCCGAACCTTTGCTTGGCAAGCAGCCCACAATCGCATTCTTACCAATCAGTTGCGTTGGAAGCGAGGTATGGCGGTCTCCCTTGTTTGTGAATATTGTGAACTCAATCAGGAAGACACTCTCCATGTCCTGCGAGATTGTCATGCCGCATCGCTTATTTGGAACAAATTTGTCAAAGCCCAAGCAAAGGTTGACTTTTACACTTGGTCTCTTAGGGACTGGCTCTACTTCAACTACACAACCAATCTGGGGAATAATCAGGCCACTGATTGGCCTAGACTTTTCTTTACTATTATTTGGTTCCTCTGGAGATGGAGATGTTATCGGGTCTTCGGTGGGCACACGCGCATTCCCTTTAATCAAGTGGATTTCATATCAAGGCAATACCAAGTCATTACTAAAGCCTTAGATGAGGATACAAATGAAGAGTCTGATCCTTGCACTAGAGTGCTCACCTTCATAAGGTGGCAATTCCCTCCCCAGGATTGGTTGAAACTGAATACTGATGGAGCTTCAAAAGGGAATCCTGGTCGGGCTAGTGCTGGAGGGGTTTTACGGAACAATTTGGGACAATGGCTTCGGGGATTCTCGCACAACATTGGAATATGTTCTTCAGTGGCTGCTGAATTATGGGGGGCTCTTACAGGGCTGCGGATGGCTTGGGAAGTTGGAGCAAGACAGGTCATTCTGGAGGTTGATTCCATGGTGGTGTACAAGCTGCTGGGGAACGAGGTTGATTGGCAATCGCCTAATGCTTCATTGATCTCTCTCTGCCATCACAACATCAACAAGGAATGGAAGGTTCACATCACACATGCTTACAGAGAAGCCAATGCTGTCGCTGATGCTCTTGCAAACAAAGCTCTCTCACTGCCAACAGGGGTTCATTACTTTGAGAGCCCACCCTTAGGGGTGGCGTCTTTGCTTTTCCAGGACTTGAGTGGTGTTGCTTTTCCACGTCTTGTTATTGCTAGTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139310.p1 GENE.R_Transcript_139310~~R_Transcript_139310.p1 ORF type:5prime_partial len:578 (+),score=85.00,RVT_3|PF13456.2|1.7e-18,zf-RVT|PF13966.2|4.6e-17,zf-RVT|PF13966.2|3.6e+02,zf-RVT|PF13966.2|1.5e+04 R_Transcript_139310:1-1734(+)
TSTIPNHVMQTTHLPATICKELDRKNRDFLWGDTINKKRMHLINWDQICRPKNLGGLWTRSARQTNISLLSKLGWRLLKEPDAPWACVLKAKYAYGRQGMDVFKSHPGASHLWRGMTKCLPVLQQGVGWNIANGQSTRFWTDCWLGPEPLLSQATCNIADHEQLRSVVDYWDVDHGWKWEEIGGKVPALTLLRLAAVHVKTEGAHQDTLVWLRSTSGVFSTSSAYDLIRSKDKDIVDKIWQAIWSVSSPEKFRTFAWQAAHNRILTNQLRWKRGMAVSLVCEYCELNQEDTLHVLRDCHAASLIWNKFVKAQAKVDFYTWSLRDWLYFNYTTNLGNNQATDWPRLFFTIIWFLWRWRCYRVFGGHTRIPFNQVDFISRQYQVITKALDEDTNEESDPCTRVLTFIRWQFPPQDWLKLNTDGASKGNPGRASAGGVLRNNLGQWLRGFSHNIGICSSVAAELWGALTGLRMAWEVGARQVILEVDSMVVYKLLGNEVDWQSPNASLISLCHHNINKEWKVHITHAYREANAVADALANKALSLPTGVHYFESPPLGVASLLFQDLSGVAFPRLVIAST*

Click here to download the sequence:
Link to NCBI Protein BLAST