Transcript Information: R_Transcript_139571.p1


Annotated TAIR IDAT1G43190.1
Annotated Gene Namepolypyrimidine tract-binding protein 3
Annotated Gene Symbol(s)PTB3
Annotation TypeOrtholog
Chromosome Positionchr1:16275432-16278185 | Reverse length=432
E-Value1.2E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.864857711142
Replicate 22.5995419563036
Replicate 37.308340090201
Condition 2: 8 Hour
Replicate 17.3457594841736
Replicate 25.9629018243162
Replicate 36.2234093555612
Condition 3: 24 Hour
Replicate 19.5110915657631
Replicate 24.7261269051237
Replicate 311.777669664854


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139571.p1 GENE.R_Transcript_139571~~R_Transcript_139571.p1 ORF type:3prime_partial len:210 (+),score=24.80,RRM_5|PF13893.2|2.9e-05,RRM_5|PF13893.2|2.3e+02,RRM_5|PF13893.2|2.9e-11,RRM_1|PF00076.18|2.5e-05,RRM_1|PF00076.18|2.1e-06,RRM_6|PF14259.2|3.2e-06,RRM_6|PF14259.2|1.5e+03,RRM_6|PF14259.2|0.00036,RRM_occluded|PF16842.1|0.11,RRM_occluded|PF16842.1|0.26 R_Transcript_139571:478-1104(+)
ATGACAGAACCCTCCAAGGTTATTCATGTTCGCAATGTCGGCCATGAAATCACTGAGAATGACTTGCTTCAATTGGTTCAGCCTTTTGGGTCTGTTACCAAGCTAGTGATGTTGCGCACCAAAAACCAGGCGCTTCTGCAGATGCAGGACGTGGCATCGGCTATCAATTTGGTAGATTATTATACAAATGTCCAGCCCAGTGTGAGGGGACGAAACGTTTACATGCAGTTCTCATCTCATCAAGAACTTACAACAGATCAGACTCAAGCACGCAAAAGCGATACAGATGGACAGCCAAATCGTATCCTTTTAGTCAGTATACATCATGTCATTTATCCTATGACAGTTGATGTTCTTCATCAAGTATTTTCTCCATACGGGTTTGTGGATAAAATTGTAACGTTCCAGAAGTCAGCTGGTTTTCAAGCCCTCGTTCAGTTTCAAACACGCCAGAGTGCTTCTTCTGCAATGAGTGCACTTCATGGCCGGAATATATACGATGGTTGTTGTCAGCTAGATATACAGTACTCTAATCTTACAGAGTTGCAAGTGAACTACAACAATGATAGATCCAGAGATTGTACAAACCCAAATCTCCCTACAGAACAGAGAGGCAGAAGTTCACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139571.p1 GENE.R_Transcript_139571~~R_Transcript_139571.p1 ORF type:3prime_partial len:210 (+),score=24.80,RRM_5|PF13893.2|2.9e-05,RRM_5|PF13893.2|2.3e+02,RRM_5|PF13893.2|2.9e-11,RRM_1|PF00076.18|2.5e-05,RRM_1|PF00076.18|2.1e-06,RRM_6|PF14259.2|3.2e-06,RRM_6|PF14259.2|1.5e+03,RRM_6|PF14259.2|0.00036,RRM_occluded|PF16842.1|0.11,RRM_occluded|PF16842.1|0.26 R_Transcript_139571:478-1104(+)
MTEPSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVASAINLVDYYTNVQPSVRGRNVYMQFSSHQELTTDQTQARKSDTDGQPNRILLVSIHHVIYPMTVDVLHQVFSPYGFVDKIVTFQKSAGFQALVQFQTRQSASSAMSALHGRNIYDGCCQLDIQYSNLTELQVNYNNDRSRDCTNPNLPTEQRGRSSQ

Click here to download the sequence:
Link to NCBI Protein BLAST