Transcript Information: R_Transcript_139574.p1


Annotated TAIR IDAT1G43190.1
Annotated Gene Namepolypyrimidine tract-binding protein 3
Annotated Gene Symbol(s)PTB3
Annotation TypeOrtholog
Chromosome Positionchr1:16275432-16278185 | Reverse length=432
E-Value4.1E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.644509264721
Replicate 27.2724615967066
Replicate 310.621559890953
Condition 2: 8 Hour
Replicate 12.8726433736992
Replicate 25.8712929974063
Replicate 313.791167845657
Condition 3: 24 Hour
Replicate 113.979893786702
Replicate 29.6106714718717
Replicate 314.061933178733


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139574.p1 GENE.R_Transcript_139574~~R_Transcript_139574.p1 ORF type:complete len:179 (+),score=18.35,RRM_5|PF13893.2|2.2e-05,RRM_5|PF13893.2|1.8e+02,RRM_5|PF13893.2|6e-06,RRM_6|PF14259.2|2.4e-06,RRM_6|PF14259.2|1.2e+03,RRM_6|PF14259.2|0.00035,RRM_1|PF00076.18|1.8e-05,RRM_1|PF00076.18|0.00027 R_Transcript_139574:478-1014(+)
ATGACAGAACCCTCCAAGGTTATTCATGTTCGCAATGTCGGCCATGAAATCACTGAGAATGACTTGCTTCAATTGGTTCAGCCTTTTGGGTCTGTTACCAAGCTAGTGATGTTGCGCACCAAAAACCAGGCGCTTCTGCAGATGCAGGACGTGGCATCGGCTATCAATTTGGTAGATTATTATACAAATGTCCAGCCCAGTGTGAGGGGACGAAACGTTTACATGCAGTTCTCATCTCATCAAGAACTTACAACAGATCAGACTCAAGCACGCAAAAGCGATACAGATGGACAGCCAAATCGTATCCTTTTAGTCAGTATACATCATGTCATTTATCCTATGACAGTTGATGTTCTTCATCAAGTATTTTCTCCATACGGGTTTGTGGATAAAATTGTAACGTTCCAGAAGTCAGCTGGTTTTCAAGCCCTCGTTCAGTTTCAAACACGCCAGAGTGCTTCTTCTGCAATGAGTGCACTTCGTGTATGCCATCGGTTTGAATTCTGGGGCATTAGTTATCTAGTGTGCATCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139574.p1 GENE.R_Transcript_139574~~R_Transcript_139574.p1 ORF type:complete len:179 (+),score=18.35,RRM_5|PF13893.2|2.2e-05,RRM_5|PF13893.2|1.8e+02,RRM_5|PF13893.2|6e-06,RRM_6|PF14259.2|2.4e-06,RRM_6|PF14259.2|1.2e+03,RRM_6|PF14259.2|0.00035,RRM_1|PF00076.18|1.8e-05,RRM_1|PF00076.18|0.00027 R_Transcript_139574:478-1014(+)
MTEPSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVASAINLVDYYTNVQPSVRGRNVYMQFSSHQELTTDQTQARKSDTDGQPNRILLVSIHHVIYPMTVDVLHQVFSPYGFVDKIVTFQKSAGFQALVQFQTRQSASSAMSALRVCHRFEFWGISYLVCIK*

Click here to download the sequence:
Link to NCBI Protein BLAST