Transcript Information: R_Transcript_139656.p1


Annotated TAIR IDAT2G42975.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17873998-17874820 | Forward length=187
E-Value5.4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1220043495384
Replicate 24.6063312137797
Replicate 32.9217777546113
Condition 2: 8 Hour
Replicate 13.9976922362849
Replicate 22.7380671642268
Replicate 32.315256456682
Condition 3: 24 Hour
Replicate 12.4597650601111
Replicate 21.9129561282644
Replicate 33.2384869179593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139656.p1 GENE.R_Transcript_139656~~R_Transcript_139656.p1 ORF type:complete len:196 (+),score=43.31 R_Transcript_139656:357-944(+)
ATGGCTTTGAACATTACAACAACAGCTAGTGGCACTAAGGTTTTGTTTGGGAAGGCCCCAAAAACAACAATTATCCCAAAAAATAAGATCTATAATTACCAGACACCATACTCATTAAGGTCAGTAGCTGCTCAATCAGAAGGAATTCAAGGCAGAGTTACTGAGCAAGACAGAGGAGCCTCTGCTTCTTCTTCTGATGATTCTGAAGGGGTGTTCCAATCTGCAAGGGCTCAATTGGATCTATTAGATCAACTCACCACCTCATCGGTCGGCTCATCTACTGGTGCTGGTTATGAAAGCGATTCGGGTTCAACTGGGAAAGGAACCATTAGAGAGCAGCTCGCAAGTTTAGTAGGAGACCGAGATGATGATTTCACCATTCCCCTTGGTAAGAATCTGAAGAAAGTGAGCCCCAAGTTCTTGACCACATCTCAGAAAAGAAACATCAGAAGACAAGCTTACCTCAATGAAGTTTCCCAGAGGAATGATTCAGTTTTCTTTGCCACCATTGGAGCGTTTGTACTTCTCCCACCTCTTGTTATCCTTGGGATTGCTATTTTAACTGGCTATGTACAGCTCTTTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139656.p1 GENE.R_Transcript_139656~~R_Transcript_139656.p1 ORF type:complete len:196 (+),score=43.31 R_Transcript_139656:357-944(+)
MALNITTTASGTKVLFGKAPKTTIIPKNKIYNYQTPYSLRSVAAQSEGIQGRVTEQDRGASASSSDDSEGVFQSARAQLDLLDQLTTSSVGSSTGAGYESDSGSTGKGTIREQLASLVGDRDDDFTIPLGKNLKKVSPKFLTTSQKRNIRRQAYLNEVSQRNDSVFFATIGAFVLLPPLVILGIAILTGYVQLFP*

Click here to download the sequence:
Link to NCBI Protein BLAST