Transcript Information: R_Transcript_139796.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeOrtholog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value1.8E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1112.86292988735
Replicate 2125.97780249779
Replicate 3119.64435453608
Condition 2: 8 Hour
Replicate 194.431542904117
Replicate 2111.18079895538
Replicate 3109.12661524368
Condition 3: 24 Hour
Replicate 1118.99644304081
Replicate 2121.78720646351
Replicate 3111.09536163788


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139796.p1 GENE.R_Transcript_139796~~R_Transcript_139796.p1 ORF type:5prime_partial len:251 (+),score=40.30,Proteasome|PF00227.22|2.3e-38 R_Transcript_139796:1-753(+)
CTTGTTGTTCAAGAAGCAGAAGAAAAACTCCCAATAAAAGCAAGCGCGACTCCATCGAGACCCCCCGTACCAAACCCCCAAATCAAAAACCTAAACATCAAGACAGAGAGAGAGAGACTAAAGAAAGAAGAAAGGATGGAGTGTGTATTTGGATTAGTAGGCAACGGTTTTGCATTGATAGCAGCAGACACATCTGCAGTTCATAGCATTCTTGTCCACAAATCCAATGAAGACAAGGTTATGATCCTCGATTCCCACAAACTTCTGGGTGCCAGTGGTGAATCTGGTGACAGAGTTCAGTTCACTGAGTACATCCAAAAGAACGTTGCTTTGTACCAATTTAGAAATGGGATTCCTTTGACTACTTCTGCTGCTGCAAATTTCACTCGTGGCGAACTCGCCACCGCCTTGCGCAAGAACCCATACTTTGTAAACATACTTCTGGCCGGGTACGATAAAGAGACTGGCCCGTCAATGTACTTTGTTGACTACATTGCAACTCTTCACAAGGTTGACAAGGGAGCATTTGGTTATGCTGCCTATTTTGCCATGTCCATGATGGACAGACACTACCACAGTGGGATGTCACTTGAAGAAGCTATTGAGTTGGTCGACAAGTGCATACTCGAGATCAGATCCAGATTGGTTGTGGCCCCACCAAATTTTGTGATCAAAATTGTCGACAAGGATGGAGCACGAGAGTATGCCTGGCGTGAGTCGGTTAAAGATGCAGGTGCCGTTGCTTCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139796.p1 GENE.R_Transcript_139796~~R_Transcript_139796.p1 ORF type:5prime_partial len:251 (+),score=40.30,Proteasome|PF00227.22|2.3e-38 R_Transcript_139796:1-753(+)
LVVQEAEEKLPIKASATPSRPPVPNPQIKNLNIKTERERLKKEERMECVFGLVGNGFALIAADTSAVHSILVHKSNEDKVMILDSHKLLGASGESGDRVQFTEYIQKNVALYQFRNGIPLTTSAAANFTRGELATALRKNPYFVNILLAGYDKETGPSMYFVDYIATLHKVDKGAFGYAAYFAMSMMDRHYHSGMSLEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVKDAGAVASA*

Click here to download the sequence:
Link to NCBI Protein BLAST