Transcript Information: R_Transcript_139797.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeOrtholog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value5.8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.505921909437
Replicate 230.172461338977
Replicate 335.972062002847
Condition 2: 8 Hour
Replicate 138.451876806044
Replicate 237.765044887336
Replicate 343.83277823886
Condition 3: 24 Hour
Replicate 141.324053009867
Replicate 240.843072019588
Replicate 342.802622498821


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139797.p1 GENE.R_Transcript_139797~~R_Transcript_139797.p1 ORF type:internal len:135 (+),score=17.55,Proteasome|PF00227.22|6.7e-23 R_Transcript_139797:1-402(+)
CCTCCATCAAGAAAAAAACACAGAGAGAGAAAAGAACAAAGGATGGAGTGTGTATTTGGACTTGTAGGCAACGGATTTGCATTGATAGCAGCAGACACATCTGCAGTTCATAGCATTCTTGTCCACAAATCCAATGAAGACAAGGTTATGATCCTCGATTCCCACAAACTTCTGGGTGCCAGTGGTGAATCTGGTGACAGAGTTCAGTTCACTGAGTACATCCAAAAGAACGTTGCTTTGTACCAATTTAGAAACGGAATACCTTTGAGTACTACTGCTGCTGCAAATTTCACTCGTGGCGAACTCGCCACCGCCTTGCGCAAGAACCCATACTTTGTAAACATACTTCTGGCCGGGTACGATAAAGAGACTGGCCCGTCAATGTACTTTGTTGACTACATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139797.p1 GENE.R_Transcript_139797~~R_Transcript_139797.p1 ORF type:internal len:135 (+),score=17.55,Proteasome|PF00227.22|6.7e-23 R_Transcript_139797:1-402(+)
PPSRKKHRERKEQRMECVFGLVGNGFALIAADTSAVHSILVHKSNEDKVMILDSHKLLGASGESGDRVQFTEYIQKNVALYQFRNGIPLSTTAAANFTRGELATALRKNPYFVNILLAGYDKETGPSMYFVDYI

Click here to download the sequence:
Link to NCBI Protein BLAST