Transcript Information: R_Transcript_139916.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value3E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6558593271158
Replicate 21.5503597353807
Replicate 31.3531406174942
Condition 2: 8 Hour
Replicate 11.756370059507
Replicate 21.8869942482013
Replicate 32.4125558419502
Condition 3: 24 Hour
Replicate 11.5983283512959
Replicate 21.1632520511908
Replicate 32.0317700553238


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_139916.p1 GENE.R_Transcript_139916~~R_Transcript_139916.p1 ORF type:complete len:474 (+),score=50.13,DUF247|PF03140.11|8.2e-93 R_Transcript_139916:1144-2565(+)
ATGAAAAATCTAACTGAATCGATTGGGATTCCGATTCTTGAGGAGATTGTTGAACTGCAGGCTCAAGCCAAAGGAGTGGAATCTTCAAAAGGAAACAAGCATGGAACTGAAGGAGTGGCGTCTGCTAATGGAGATGAGCTTCTCAACGCTCATAGGGCCCAAGGAGTGGAAGCAATGAAAGATCAACTTCGATCTTTGCGTCCTGTATCTCGTAATCGTTGCATTTACAGAGTTCCCCACTATATCTTCCGGGTGAATGAAGAAGCTTATCGGCCTTTGGTTGTGTCGATTGGTCCTTACTACGCTCAAGATCCACGCCTACAAGCAACTCAAAAGCAAAAACTGAGGCACCTCCATAAGTTCCTACAACGAAGCAACACTTACAGATTGGAGAATTACATGAGCTATGTGAGAGAAAAGGAAGAGGAAGCTCGTGAATATTATGATGAAGAAGTGCTTCTCAACAGCAACGACTTCGTCAATATGCTATTGCTGGATGCTGCCTTCATCATAGAGTTCTTATTGTGGTTTGCTGGTGAAAGTTATGTTGCAGAGCAAATGATGGAAGTTGTTCTTCAAGCAGGGCGGGATTTACTTCTAGAAGAAAACCAACTTCCGTTTTTCATTCTAGAGGGACTATATGACCTAGCATTTCCAATTGGTATGGACTCTCGCTCTTTATCCTTCATGGATCTTTGTTGTGATTTCATCATTGGACATTTTAACATCCAAAAAGTTACTTCAACTGCGAGTGCTCGTGAAAAAATACTCAAGTGGTCCTCAAAAGTCAAGCGTCTTGTTGATCTCTTAGGTATCTACTTCCTACCTTCCTTCCCATGGGAAGGACGTCCTCAGAAGGAATGGAAGTTTCCTAAGAGTGCCTCAGAGCTAAACTCAGCCGGAGTCAAATTTGCAGCAGTCCCAGGAAGTACAAATTTACTTGACATAACATTTGTTAAGGGGATGTTGAAGATTCCAAAATTTATGATTCAGGATTCCACGGAATCTACCTATCGGAGCATCACGTTGCTCGAACAGTGCCATGGCAATTATTATTCGGAATCCCACTTTACCGATTACGTGTTCTTCCTTGCTAGTTTGATCAATACATCCAAAGACGTGCAAATACTTGTTGAAAATGGAATACTAGATAATTGGCTTGGGAACGCGGAGGAGGTGGCGGATTTATTCAACAAGATCACCACTAATTTAACATTATATGGCCCTAAATTCTATTACGCAGACATTAGTGGAGATCTGAACGAATATGCAGACAAGTCGTGGCACCGATGGAAGGCCATATTGAAAACAGACTACTTTAGTCACCCATGGTCAACTATTTCAGTGTTCTACTTGGTGATGCTTCTTATTCTTACTGTACTGCAGGTTTACACTGGTTTTCGCTCCATCTATAATAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_139916.p1 GENE.R_Transcript_139916~~R_Transcript_139916.p1 ORF type:complete len:474 (+),score=50.13,DUF247|PF03140.11|8.2e-93 R_Transcript_139916:1144-2565(+)
MKNLTESIGIPILEEIVELQAQAKGVESSKGNKHGTEGVASANGDELLNAHRAQGVEAMKDQLRSLRPVSRNRCIYRVPHYIFRVNEEAYRPLVVSIGPYYAQDPRLQATQKQKLRHLHKFLQRSNTYRLENYMSYVREKEEEAREYYDEEVLLNSNDFVNMLLLDAAFIIEFLLWFAGESYVAEQMMEVVLQAGRDLLLEENQLPFFILEGLYDLAFPIGMDSRSLSFMDLCCDFIIGHFNIQKVTSTASAREKILKWSSKVKRLVDLLGIYFLPSFPWEGRPQKEWKFPKSASELNSAGVKFAAVPGSTNLLDITFVKGMLKIPKFMIQDSTESTYRSITLLEQCHGNYYSESHFTDYVFFLASLINTSKDVQILVENGILDNWLGNAEEVADLFNKITTNLTLYGPKFYYADISGDLNEYADKSWHRWKAILKTDYFSHPWSTISVFYLVMLLILTVLQVYTGFRSIYNN*

Click here to download the sequence:
Link to NCBI Protein BLAST