Transcript Information: R_Transcript_14000.p1


Annotated TAIR IDAT5G53930.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21894387-21896283 | Reverse length=529
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1798855588402
Replicate 23.627633056219
Replicate 35.0770605143305
Condition 2: 8 Hour
Replicate 13.8886801225119
Replicate 23.8243742066949
Replicate 34.8467651394751
Condition 3: 24 Hour
Replicate 14.9681816688225
Replicate 23.7336127615812
Replicate 35.882559374838


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14000.p1 GENE.R_Transcript_14000~~R_Transcript_14000.p1 ORF type:complete len:573 (+),score=146.43 R_Transcript_14000:312-2030(+)
ATGGTCAGTGCTTCACATTCATCAAAACGCAAGAAGAAACGGTCTCAGAAGCGTAGTAAGAAGAGTAGTAGAAGCATTAAGGAGAAAACCAAGAAGCTCAAACGACGCGACAATGCAGATTCGTATTCTGATGATGATTCAACATCTGCTTCTTTGGTATCATGTTCTAGTTCAAAGGTTGAATATAAGAGGAAAAGTAGAGTAAAGACTCGAGATAGAAAGGAAAGGAAGAGTCGTAGGAAGAGGACCAAGAAAGATGATTTGAAGAGTGAAAGCAGCAGCGAAGATTCTCGTCGTGTTAAGAAAAGGAAAAGATCGAGGAAGAATAAAGATTCTGTTTTAAGGAAGAAAAGACGCAAGAAGCATCGCAAGAGGGAACTGAGTGTTAGTTCTTTGAGTGACCAGTCTAATAGTTGCCCGACGGGTGAACCTAGTGACGATAGTGAGAGAGAGATCGGAAGGAAAGGAAAGAAGTTAAAAATAAAGGAGCAGAAGGGGAGAGATAAGAGCAGGGAACGGAGTGTGAGTAAGAGGCGTAGGCATAGTTCAAGGAGTTGCTCTCCATTTAGCTTGCATAGTGAGAGTCAGAGCTACTATAGTGAAGAGAGAGTGATTGAAAAGAATCATCCAAAGAGATTGAAATCTGTTATAGTTTGTATAACAGGAGGAGAAGAAACTGAGCTTAGAGAATCAACTAGAGATGGTCAAAAGGATGAAATCATTTACGAACATGATGACTATCCTAGTAGGAGTAATGATAGTAATGATTTTGTGAGTAGAAAAGAGGAATTGGTAGATTCAGATGATGCTAGGCATGAGAATACGAGGTCCTTGGAGGATCCAAAGGCTGTTACTTCTGATTTTCGGACTTCTGAATTTTCAGGAAGTCAAAGGCTAGATGTAGAGAGAATTGGTGGGGTAACTTCAAACTCTGTTGCATCTGGGGTTAGTGATCACTTGAAGGCCAATAGGAGTGACATGTCCATGCCTAATACTGGCTCAAATCGTGGTGATCTTGAGGCAATTTTAAGACAGCAGGCTTTGAAAAATCTGCTGAAACGCCAAAGTAAGTTAGTGACAGCAACTACTGCAGATGAGAAAAATGACCCTGATGGTGAAGCAAAGTTGTTATCCTCTGTGAAGAATGGAAAAGTTTGGGTTAAGCCTGAAGGAGTAGGAAGTACTAAATCGGAGCGAAATGTTGGAAAGAACGATGATGTACAACATACTACGAGTAAACAAGACAATGATGTTTGTCCACAAATTAGGAACCCTGAGACCTGCCTTTCAACAGAAAAGGCTAATGCCCCTGGTAGTGTGAGTGGCCGACCTAAGCTAGACTTGTCAAAGTCAACATCAACAAGAAGATTTCTTGGATCAAGCAACACCTGGAGACGGGAGTTGCCCTCACAAGAATCTCCTCAACCAAACCTGTCAATCCCTAAAAAAGTTATAGCTACACATTCTGCTAAGCGATCTGAATCTCTGTCTGTTGATACCAACATGGGTGTTGAAAAAGGTGAGTGCACTTTGACATCTGAGCCTTCTTCTTCTGGAGAGAAAAGCACAAAAGATGAGACAAATGAAGCAGATGATGACTCAGAGTTTCAGCAGAAAACTATGTCCGTCATGCGGGGTGGTGAATTGGTGCAGGTAAGCTATAAGGTCAAAATCCCAAAGAAAGCCCCTGCTTTGGCGAGAAGGCAACTGAAACGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14000.p1 GENE.R_Transcript_14000~~R_Transcript_14000.p1 ORF type:complete len:573 (+),score=146.43 R_Transcript_14000:312-2030(+)
MVSASHSSKRKKKRSQKRSKKSSRSIKEKTKKLKRRDNADSYSDDDSTSASLVSCSSSKVEYKRKSRVKTRDRKERKSRRKRTKKDDLKSESSSEDSRRVKKRKRSRKNKDSVLRKKRRKKHRKRELSVSSLSDQSNSCPTGEPSDDSEREIGRKGKKLKIKEQKGRDKSRERSVSKRRRHSSRSCSPFSLHSESQSYYSEERVIEKNHPKRLKSVIVCITGGEETELRESTRDGQKDEIIYEHDDYPSRSNDSNDFVSRKEELVDSDDARHENTRSLEDPKAVTSDFRTSEFSGSQRLDVERIGGVTSNSVASGVSDHLKANRSDMSMPNTGSNRGDLEAILRQQALKNLLKRQSKLVTATTADEKNDPDGEAKLLSSVKNGKVWVKPEGVGSTKSERNVGKNDDVQHTTSKQDNDVCPQIRNPETCLSTEKANAPGSVSGRPKLDLSKSTSTRRFLGSSNTWRRELPSQESPQPNLSIPKKVIATHSAKRSESLSVDTNMGVEKGECTLTSEPSSSGEKSTKDETNEADDDSEFQQKTMSVMRGGELVQVSYKVKIPKKAPALARRQLKR*

Click here to download the sequence:
Link to NCBI Protein BLAST