Transcript Information: R_Transcript_14001.p1


Annotated TAIR IDAT5G53930.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21894387-21896283 | Reverse length=529
E-Value9E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.179923452468
Replicate 24.7718864582496
Replicate 37.2084139288592
Condition 2: 8 Hour
Replicate 15.6077767623936
Replicate 25.3947582064399
Replicate 38.1555313451739
Condition 3: 24 Hour
Replicate 17.2646208185567
Replicate 25.1282332735084
Replicate 37.4617175068968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14001.p1 GENE.R_Transcript_14001~~R_Transcript_14001.p1 ORF type:complete len:572 (+),score=141.47 R_Transcript_14001:312-2027(+)
ATGGTCAGTGCTTCACATTCATCAAAACGCAAGAAGAAACGGTCTCAGAAGCGTAGTAAGAAGAGTAGTAGAAGCATTAAGGAGAAAACCAAGAAGCTCAAACGACGCTACGATTCAGATTTGTATTCTGATGACGATTCAACATCTGCTTCTTTGGTATCGTGTTCTAGTTCAGAGGTTGAATATAAGAGGAAAAGGAGAGAAAAGTCTCGAGATAGAAAGGATAGGAAGAGTCGTAAGAAGAGGACCAAGAAAGATGATTCGATGAGTGAAAGCAGCGAAGATTCTCATCGTGTTAAGAAAAGGAAAAGATCCAAGAAGAATAAAGATTCTGATTCGAGGAAGAAAAGGCGCAAGAAGAAGCGCAAGAGGGAACCGAGTGTTAGTTCTTTGAGCGACCAGTCTAATAGTTGCCCTACGGGTGAACCTAGTGACGATAGTGAGAGAGAGATCGGAAGGAAAGGAAAGAAGTTGAAAATAAAGGAACGGAAGGGGAGAGATATTAGCAGGGAACGGACTGTGAGTAAGAGGAGTAGGCATCGTTCAAGGAGTTGCTCTCCATTTAGCTTGCATAGTGAGAGTCAGAGCTACTATAGTGAAGAGAGAGTGATTGAAAAGAATCATCCAAAGAGATTGAAATCTGTTATAGTTTGTATAACAGGAGGAGAAGAAACTGAGCTTAGAGAATCAAGTAGAGATAGTCATAAGGATGAAATCGTTTACGAACATGATGACTATCCTAGTAGGAGTAATGATAGTAATGATTTTGTGAGTAGAAAAGAGGAATTGGTAGATTCAGATGATGCTAGGCATGAGAATACGAGGTCCTTGGAGGATCCAAAGGCTGTTACTTCTGATTTTCGGACTTCTGAATTTTCAGGAAGTCAAAGTCTAGATGTAGAGAGAAGTGGTGGGGCAACTTCAAACTCTGTTGCATCTGGGGTTAGTGATCACTTGAAGGCCAATAGGAGTGACATGTCCATGCCTAATACTGGCTCAAATCGTGGTGATCTTGAGGCAATTTTAAGACAGCAGGCTTTGAAAAATCTGCTGAAACGCCAAAGTAAGTTAGTGACAGCAACTACTGCAGATGAGAAAAATGACCCTGATGATGAAGCAAAGTTGTTATCTTCTGTGAAGAATGGAAATGTTTGGGTTAAGCCTGAAGGAGTAGGAAGTACTAAATCGGAGCGAAATGTTGGAAAGAACGATGATGTACAACATACTACAAGTAAACAAGACAATGATTTTTGTCCACAAAATAGGAACCCTGAGACCTGCCTTTCAACAGAAAAGGCTAATGCCCCTGGTAGTGTGAGTGGCCGACCTAAGCTAGACTTGTCAAAGTCAACATCAACAAGAAGATTTCTTGGATCAAGCAACACCTGGAGACGGGAGTTGCCCTCACAAGAATCTCCTCAACCAAACCTGTCAATCCCTAAAAAAGTTATAGCTACACATTCTGCTAAGCGATCTGAATCTCTGTCTGTTGATACCAACATGGGTGTTGAAAAAGGTGAGTGCACTTTGACATCTGAGCCTTCTTCTTCTGGAGAGAAAAGCACAAAAGATGAGACAAATGAAGCAGATGATGACTCAGAGTTTCAGCAGAAAACTATGTCCGTCATGCGGGGTGGTGAATTGGTGCAGGTAAGCTATAAGGTCAAAATCCCAAAGAAAGCCCCTGCTTTGGCGAGAAGGCAACTGAAACGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14001.p1 GENE.R_Transcript_14001~~R_Transcript_14001.p1 ORF type:complete len:572 (+),score=141.47 R_Transcript_14001:312-2027(+)
MVSASHSSKRKKKRSQKRSKKSSRSIKEKTKKLKRRYDSDLYSDDDSTSASLVSCSSSEVEYKRKRREKSRDRKDRKSRKKRTKKDDSMSESSEDSHRVKKRKRSKKNKDSDSRKKRRKKKRKREPSVSSLSDQSNSCPTGEPSDDSEREIGRKGKKLKIKERKGRDISRERTVSKRSRHRSRSCSPFSLHSESQSYYSEERVIEKNHPKRLKSVIVCITGGEETELRESSRDSHKDEIVYEHDDYPSRSNDSNDFVSRKEELVDSDDARHENTRSLEDPKAVTSDFRTSEFSGSQSLDVERSGGATSNSVASGVSDHLKANRSDMSMPNTGSNRGDLEAILRQQALKNLLKRQSKLVTATTADEKNDPDDEAKLLSSVKNGNVWVKPEGVGSTKSERNVGKNDDVQHTTSKQDNDFCPQNRNPETCLSTEKANAPGSVSGRPKLDLSKSTSTRRFLGSSNTWRRELPSQESPQPNLSIPKKVIATHSAKRSESLSVDTNMGVEKGECTLTSEPSSSGEKSTKDETNEADDDSEFQQKTMSVMRGGELVQVSYKVKIPKKAPALARRQLKR*

Click here to download the sequence:
Link to NCBI Protein BLAST