Transcript Information: R_Transcript_14005.p1


Annotated TAIR IDAT2G30800.1
Annotated Gene Namehelicase in vascular tissue and tapetum
Annotated Gene Symbol(s)HVT1, ATVT-1
Annotation TypeOrtholog
Chromosome Positionchr2:13120585-13126635 | Reverse length=1299
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.057723961094
Replicate 28.0937351604762
Replicate 310.271085567307
Condition 2: 8 Hour
Replicate 112.223185808343
Replicate 214.336210535276
Replicate 318.415101742296
Condition 3: 24 Hour
Replicate 116.736982043423
Replicate 214.531569769034
Replicate 316.574640887901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_14005.p1 GENE.R_Transcript_14005~~R_Transcript_14005.p1 ORF type:complete len:1240 (+),score=251.90,HA2|PF04408.19|1.5e-16,Helicase_C|PF00271.27|4.6e-12,R3H|PF01424.18|4.5e-11,OB_NTP_bind|PF07717.12|2.2e-10,DEAD|PF00270.25|1.7e-09 R_Transcript_14005:262-3981(+)
ATGAAACCCTCTTCAAAGGGTGGTGGTAAGAAGAAACAGAAGAAAGGGTTTCGTCCAGAGCACACTTCTGGTGTTGCTGAATCCACTCGCATTCGTGTTTCCCAAATCCTTGACCAGTTCCGTTCTTCTAATGATCAAGTTTATACTTTTGAAGATAACCTGACCAACCATGAGAGGGCAGTGGTTCATGAAATGTGCAGAAAAATGGGTATGACATCAAAAAGTTATGGGAAAGGGAATCAACGACGTGTCTCAGTTTACAAGAGCAAGAAAAAATCAGAACCTTTGGAAGGAAAGGAAAATGTGAGTTTACTTGCGTTCTCAGAAGAATCCAGAAGGGTCCTCGTGGATTTATTTATGCATTATCCTCCTGGTGAAGATGAGGTGGGGAATCAACATATAAATGAAGACGTTGGGGAAACTCATAAACCGCGGGGCAAAAAAGATGATATTTTTTGGAAGCCTCGAATGAACAAGGCTGAAATAGCAAAGAAAGCGGAATCGCTTGCTTCTAAAGTAGAGAATACACCAAAACTGAAGGAGATTGCTGAGAAGAGGTTTAAACTTCCTATTGCTTCTTTCGAGGATACCATCACGTCAACAGTCGCAGCTCATCAGGTAGTGCTTATATCTGGTGAGACTGGATGTGGGAAGACTACACAGGTTCCACAATATCTACTAGATTACATGTGGGCTAAGGGTGAGGCTTGTAAAATAGTTTGTACACAGCCACGACGTATTTCTGCAATGTCAGTTGCTGAAAGAATTTCTCATGAGAGAGGGGAAAAAATTGGAGAAAGTGTGGGGTACAAGATACGATTGGACACTAAAGGTGGGAGACAATCCTCCATATTGTTTTGCACAAACGGAATCCTGCTGAGGGTGCTTGTTTCAAGGGGAGTATCCCAATCAGGGGCATCAAGTATACAGACAGAGAAGGATATTTCCGAGATCACACACATTATTGTGGATGAGATTCATGAAAGGGATCGATACTCTGATTTTATGCTTGCTATTCTCAGAGAGTTGCTTCCAGCATATCCTCAACTGCGTTTGGTTCTGATGAGTGCTACACTTGATGCTGAAAGATTTTCTCGGTATTTTGGTGGCTGCCCTATCATCCGAGTTCCTGGATTCACACATCCTGTGAAAACTTTTTACCTAGAGGAAGTTTTGGCCATCCTGAAAAAACCGGACAAAAATCATCTTAATGCTTCTTCATCCAGTTGCTCAAGTGAGGAGCTCAGCTTAAGTGAAGATTATAAGGTAGCCCTAGATGAGGCAATTGAGATGGCTTGTTCAAATGAAGAGTTTGATCCTCTCCTAGAATTAATTTCTTCTGTCGGAACGCCTACAGCCGTCAATTATCAGCACTCTGCAACTGGAGTGACCCCTTTGATGGCTTTTGCTGGAAATGGGAAGGTAGAAGATATTTGTACGCTTCTTTCGTTAGGTGCAGACTGCCATCTGCAGGACCAGAATGGAAGCACTGCTTTGGAATGGGCAATGCACGGAGATCAACTGGAAACAGCTGAAATTATTAAGAAACACATGGAAAGCATCTCTAGCTCAACGGAGGACGAACAATTGCTTAAGAAATATATGTCAAGCATCAATCCTGAGTTTATTGACTATGTTCTAATAGAGAAGTTGCTTAGGAAGATATGTACCGAGTCAACTGATGGAGCTATCCTTGTTTTCCTTCCCGGATGGGAGGATATAAATAGGACCCGAGAAAGATTACTGGCTAATCCCTTTTTCAAGGATTCGTCGAAGTTTCTAATATTACCTCTCCATTCAATGGTCCCATCTACGGAGCAAAAGAAGGTCTTCAAGCGGCCATCTTCAGGTTGCCGGAAGATTATTCTCTCAACAAATATTGCTGAGACTGCAATAACCATTGATGATGTAGTGTATGTTCTTGATAGTGGTCGGATGAAGGAGAAAAGTTATGACCCATACAATAATGTGTCAACGCTACAATCTTCATGGATTTCACAGGCTAATGCAAAGCAGAGAGAAGGACGTGCAGGCCGCTGCCAGCCAGGAGTCTGTTATCATCTCTATTCGAAAATAAGAGCTGCATCTCTTCTTGCATTCCAAGTGCCTGAAATAAAGAGAATGCCGATTGAGGAGTTATGTTTGCAGGTGAAGCTGATCGATCCGAATTGCAAGATAGAAGAATTCTTGAAGAAAACACTAGATCCTCCAGTATTCGAAACCATAGAGAATGCTATTGCAGTTCTCCAAGACATTGGTGCTTTGTCACTTGATGAGCAACTGACAGACTTAGGGGAGAAACTAGGTTCCTTGCCGGTTCATCCGTTAACCAGCAAGATGCTATTCTTCGCTATATTACTGAACTGTCTAGATCCGGCTTTAACTCTTGCATGTGCAGCTGACTATAGAGATCCCTTCACTGTACCAATGTTACCAAATGAGAAGAAAAAGGCTGCCGCAGCAAAAGCTGAGCTTGCATCATTGTATGGGGGGCATAGCGATCAGTTGGTGGTTATTGCAGCATTTGACTGCTGGAAAAGTGCAAGGGAGAAGGGTCAAGAAGCATGGTTTTGTTCCAAGTATTTTATCTCCTCAACCACCATGCTTATGCTGTTTGGTATGCGTAAACAGCTTCAGAATGAGTTGATTCGGGGTGGATTTATTCCAGATGATGTATCAGCCTGTAGTATGAATGCAAGGGATCCAGGTATAGTTCGTGCGGTTCTTGTGGCCGGTTTGTATCCAATGGTGGGAAGATTGCATTTGCCTAACAAGAATGGTAACCGGTTCCTCGTGGAGACTTCAAGTAGCAGTAAAGTTCGTTTGCATTCTCAGTCATTAATCTCCAAATTATCATTTAAGAAATGCAAGGAGCGCCCTTTACTAGTATATGATGAGGTGACTAGGGGGGATGGAGGCTTACACACGAGGAACTGCACCATCATTGCTCCCCTTCCGTTACTATTACTTGCAACAGAAATTGTTGTTGCTCCAGGAAAGTGCAACAATGATGATGATATGGATGGTGAGGATGACGATAGTGGAAGTGACGTTGATGGTGATGAGGAAGGTAGCGATGAAGGCGAAATGGATAATCTTGGCAAGACAAGCAAACAGGGAGAAAGTATCATGTCATCACCTGATAATGCTGTTACAGTTGTTATAGATCGCTGGCTCTCTTACGAGTCAACAGCACTCGAAGTTGCTCAGATTTACTGCTTGAGAGAACGATTATCTGCTGCTATTCTTTTTAAAGTAACGAATCCACGACAGGTTCTTTCCCCAGTACTAGGAGCATCTGTTTATGCAATTGCCTGTCTTCTGGCTTATGATGGGTTAACGGGAATTTCCTCCCCTGTGGAATCTGTAGACGCTTTGACTTCAATGGTGAATGCTGCTGAAATTGGGAGGTCAACTGGGAAGAAGGCAAATCAGGCTCCAAATAACTTCCTCATATCACTAGTTAGGCATGATTCTGGCCGCCATAATAATTCACCATATCCTAAAAAATACAGAAGACCACAAAATTTACCACCTCCAGAACCAAGGCTGATGCTTGTGCAGCCGTCTATGCAGCGTCCTCCAGCACCAGCAGCACAATCAAGGCCGTCTCCAAGACCCAGGGTTGTAGATCTAGCCGGGTTTGGCTCGGACAGGTATGGACCGTACGGGCCAAGAGGCGACTCATCAAAGCGAACACGTGGCAATAGGTCAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_14005.p1 GENE.R_Transcript_14005~~R_Transcript_14005.p1 ORF type:complete len:1240 (+),score=251.90,HA2|PF04408.19|1.5e-16,Helicase_C|PF00271.27|4.6e-12,R3H|PF01424.18|4.5e-11,OB_NTP_bind|PF07717.12|2.2e-10,DEAD|PF00270.25|1.7e-09 R_Transcript_14005:262-3981(+)
MKPSSKGGGKKKQKKGFRPEHTSGVAESTRIRVSQILDQFRSSNDQVYTFEDNLTNHERAVVHEMCRKMGMTSKSYGKGNQRRVSVYKSKKKSEPLEGKENVSLLAFSEESRRVLVDLFMHYPPGEDEVGNQHINEDVGETHKPRGKKDDIFWKPRMNKAEIAKKAESLASKVENTPKLKEIAEKRFKLPIASFEDTITSTVAAHQVVLISGETGCGKTTQVPQYLLDYMWAKGEACKIVCTQPRRISAMSVAERISHERGEKIGESVGYKIRLDTKGGRQSSILFCTNGILLRVLVSRGVSQSGASSIQTEKDISEITHIIVDEIHERDRYSDFMLAILRELLPAYPQLRLVLMSATLDAERFSRYFGGCPIIRVPGFTHPVKTFYLEEVLAILKKPDKNHLNASSSSCSSEELSLSEDYKVALDEAIEMACSNEEFDPLLELISSVGTPTAVNYQHSATGVTPLMAFAGNGKVEDICTLLSLGADCHLQDQNGSTALEWAMHGDQLETAEIIKKHMESISSSTEDEQLLKKYMSSINPEFIDYVLIEKLLRKICTESTDGAILVFLPGWEDINRTRERLLANPFFKDSSKFLILPLHSMVPSTEQKKVFKRPSSGCRKIILSTNIAETAITIDDVVYVLDSGRMKEKSYDPYNNVSTLQSSWISQANAKQREGRAGRCQPGVCYHLYSKIRAASLLAFQVPEIKRMPIEELCLQVKLIDPNCKIEEFLKKTLDPPVFETIENAIAVLQDIGALSLDEQLTDLGEKLGSLPVHPLTSKMLFFAILLNCLDPALTLACAADYRDPFTVPMLPNEKKKAAAAKAELASLYGGHSDQLVVIAAFDCWKSAREKGQEAWFCSKYFISSTTMLMLFGMRKQLQNELIRGGFIPDDVSACSMNARDPGIVRAVLVAGLYPMVGRLHLPNKNGNRFLVETSSSSKVRLHSQSLISKLSFKKCKERPLLVYDEVTRGDGGLHTRNCTIIAPLPLLLLATEIVVAPGKCNNDDDMDGEDDDSGSDVDGDEEGSDEGEMDNLGKTSKQGESIMSSPDNAVTVVIDRWLSYESTALEVAQIYCLRERLSAAILFKVTNPRQVLSPVLGASVYAIACLLAYDGLTGISSPVESVDALTSMVNAAEIGRSTGKKANQAPNNFLISLVRHDSGRHNNSPYPKKYRRPQNLPPPEPRLMLVQPSMQRPPAPAAQSRPSPRPRVVDLAGFGSDRYGPYGPRGDSSKRTRGNRSG*

Click here to download the sequence:
Link to NCBI Protein BLAST