Transcript Information: R_Transcript_140343.p1


Annotated TAIR IDAT4G33590.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); Has 126 Blast hits to 126 proteins in 35 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 21; Plants - 62; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16142585-16143985 | Reverse length=466
E-Value8.2E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.724322530555
Replicate 21.9698021712518
Replicate 32.3932412413891
Condition 2: 8 Hour
Replicate 11.253008014358
Replicate 20.57213343730112
Replicate 31.122381040493
Condition 3: 24 Hour
Replicate 12.6922801652958
Replicate 23.8561433454741
Replicate 32.7067950359063


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140343.p1 GENE.R_Transcript_140343~~R_Transcript_140343.p1 ORF type:complete len:469 (+),score=59.86,DUF563|PF04577.10|2.9e-17 R_Transcript_140343:249-1655(+)
ATGTCCTTTAACTGCACATCAAGGCAGTCTATTTTCATTGTAGCTCTTTTTCTCACAGTCTATATTCTTTTCCAAATCCCATTTCTTCACACCAACTTATCAACTTCATATTCATCCTCATCACTAAAATCATGGCCGTCCATCATGTGCAAGGATCACCTGATGCTGGAATCCACGGCCGAGAAGCTCCGCCAATCGGTGACATTCCTCCCCCTGAAGGACATCAGGTACACCGGAGCCGCCCTCCAAGGGAACACATGGTTCATGAGCTCAATGAATGACAGTCAAGAAGAAGATGATGTGAAATATCAAAAGTTCCCCTCAGAAGCCTCAAAGGGTAGGATCCTGTGCATCAAGGGGCATGATACTCATGATGGGTCTCGGAATTACTATGCACTGGCGTGGCCTGAAGCTTTACCTCAAAATGCTAACCTTAGAAAAGGGTTAACATTTGTGTCTTATAATCATTATGACTATGCTAATTTATGGCATGGTTTGGCAGCTGTTTTTCCCTTTGTAAGATGGCATATGAAGAATGATTGCAAAGTGCCGTCTAGATGGGTGTTGTACCATTGGGGTGAGCTTAGGAGTAATTTGAGTCTTTGGCTAGGGTTGCTCTTGAAGGCTACTTTTGGTGCGCCCGTCAATATTGAAGTATTTGAAGGAGTAGAAGATGATCAGCCAGTATGCTTTGAAGAGGCAGTGGTTATGAGGCACGGTGATGGAGGGATTTCAAGGGAGAAAAGGATGGAGACGTACGATCTTCTGAGGTGTAAGGCTAGGCTCTTTTGTAATTTGACTTCTGAAGCACATACGGTGTCGTTTAATGACCAAGCTAATGATCATCCGATTATTGGAATGACCATGTTCATGAGAACTGGTGGCAGATCTTTTAAAAATGATACTGCAGTTATTGACATCTTTAGAAGTGAGTGTCACAAGTTTCAAGGCTGTCGTTTAACGGTTGCTTATTCAAACAATCTCACCTTTTGTGAACAGGTTGAGTTGATGAGTTCAACAGACATATTGGTTTCTCCTCACGGAGCACAATTGACCAACCAATTTCTAATGGATAGGAATAGTAGTGTAATGGAATTCTACCCAAAAGGGTGGTTAAAACTTGCAGGAGTAGGCCAATATGTGTATCATTGGTTGGCTAGTTGGTCAGGGATGAAACACCAAGGCGATTATCGTGATCCTAATGGAGTTAACTGTCCTTACCCAGAGGATGATCGAAGGTGCATGCCCATCTTCAAGAATGGTCAAATTGGACATAATGAAACTCACTTTAGGGAGTGGGCTATTAATGTATTCAATCAGGTTAAGACTAGGAAGGTGCAAGAACAAGAAGCTAGCTCTCAGCTCACTAATTATGGATCTACTTCTACTCCTTGTGCTTGTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140343.p1 GENE.R_Transcript_140343~~R_Transcript_140343.p1 ORF type:complete len:469 (+),score=59.86,DUF563|PF04577.10|2.9e-17 R_Transcript_140343:249-1655(+)
MSFNCTSRQSIFIVALFLTVYILFQIPFLHTNLSTSYSSSSLKSWPSIMCKDHLMLESTAEKLRQSVTFLPLKDIRYTGAALQGNTWFMSSMNDSQEEDDVKYQKFPSEASKGRILCIKGHDTHDGSRNYYALAWPEALPQNANLRKGLTFVSYNHYDYANLWHGLAAVFPFVRWHMKNDCKVPSRWVLYHWGELRSNLSLWLGLLLKATFGAPVNIEVFEGVEDDQPVCFEEAVVMRHGDGGISREKRMETYDLLRCKARLFCNLTSEAHTVSFNDQANDHPIIGMTMFMRTGGRSFKNDTAVIDIFRSECHKFQGCRLTVAYSNNLTFCEQVELMSSTDILVSPHGAQLTNQFLMDRNSSVMEFYPKGWLKLAGVGQYVYHWLASWSGMKHQGDYRDPNGVNCPYPEDDRRCMPIFKNGQIGHNETHFREWAINVFNQVKTRKVQEQEASSQLTNYGSTSTPCACS*

Click here to download the sequence:
Link to NCBI Protein BLAST