Transcript Information: R_Transcript_140593.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value5E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0121933899154
Replicate 23.4223044731411
Replicate 34.5914385930614
Condition 2: 8 Hour
Replicate 14.1888447376712
Replicate 24.071584946119
Replicate 35.1975977547364
Condition 3: 24 Hour
Replicate 14.6690988267798
Replicate 24.1616751357404
Replicate 34.1782696171757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_140593.p1 GENE.R_Transcript_140593~~R_Transcript_140593.p1 ORF type:complete len:1362 (+),score=235.39,RVT_1|PF00078.23|2.6e-44,zf-RVT|PF13966.2|2.8e-14,Exo_endo_phos|PF03372.19|2.4e-11,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.1e-10,Exo_endo_phos_2|PF14529.2|1.9e-06 R_Transcript_140593:458-4543(+)
ATGTTAGCCATTTCTTGGAACTGCCAGGGGATTGGCCACCCTGAGACAGTTCTGCATCTTAAGGCCCTTATTAAAAAATATAAACCTACAGTGGTTTTCCTTGCTGAGACTATGCTTATGGAGGATAAGGCAGTTGATAACTTGAGGCATTTGGGTTTTGATAACTTGTTTGCCTCATCTGCGGCTGGTAAGTCTGGTGGTTTGGTAGTCATGTGGAATAACTATTGTGGATCTGAGTTAGTTCTTACAACTGACCAACTTTACCTGATAAGATTCAAAGATGGAGTGAGAGATCTGGTTTGGTATTTGTGCTGTGTCTATAGGGCCCCTAATCATGGGGATAAGGAGGCTTTCTGGGAGGCCTTAGATTCACTTATTTCGTTTATTAATAACCCCATTTGCATTATAGGGGATTTCAATGATATACTTGATAGCGGAGAGAAGTGGGGAGGCAGGCTGGGCTCTAGCTCAAATAGTGGAGGATTGAGAAGAATTGTTAACAAACATGGTCTTTTTGACCTGGGTTATCAAGGAAATCCATTCACTTGGTTCAGAAGGAGAGGTGGTAGGGTCGTCCTTAAAGAGAGGCTGGATAGGGCTATCTGGAACTCTAGTTGGAGAGATCTTTTTCATAATGCAAATGTTACTCACACCCCAGCAATCAAATCTGATCACTCCCCCATTATTTTAAATTGTTTGGGTGTCCAGGATAGGGGTCCGACTCCTTTCAGGTTTGAAGCTATGTGGGTGAGGGAGGATTCTTGTTATCACGCTGTGGAAGAGGCGTGGCAAGAGGATATTCTTGGCTCCTATGGGTTTAGACTGAAGCATAAATTGAAAGTGACCAAAAGGAAACTAAGAGAATGGAATTTGAATACTTTTGGGAATGTTCAACAAAGGATTAGATGTCTAGTACAACAGATCGATGATATTCAGCAGAATAATAATAGTAGTATTTCAAGTTCGGGTTTGGAGGAGAGTCTCATGGCTGAATTGGCGGAATTATACACTAGAGAGGCTATTATGCATAAGCAAAAGTCCAGGATAGCCTATCTAAAGGAGGGAGATCAAAACACCAGGTTTTTTCATCTGTCAACAGTCAACAGAAGAAGAAGAAACGCAGTAGAGGCCTTAAAACTGACAAATGGAATTTGGGTGGACTCTGAACAGGATATTGCCATAGCTTTCTCTGATTATTTTAAAGAATTATTTTCTTCTTCTAATCCACCTGAAGCTGATCTTACAGGCCTTTATGAACCTATTATTAGCGAACAGGATAATATATCTTTGTGTGTTGCCCCTGATGCAGAGGAGATTATGCAGACTGTGAATTCAATGGGAGCTACCAAGTCCCCTGGACCTGATGGCTTTCCTGCTCTCTTTTACCAGCAGTATTGGCCAATTGTGAAAGACGATTTGGTAAAGATGGTGCAGGCTTTCTTCCATTCTGGTTTTCTGTTAAGAGAGTTAAACCACACTTTTATAACCCTTGTACCTAAGTCTGATCAGGCGATGAAGGTAACTGATTTTCGCCCTATATCCTTGTGTAATGTTGCCTACAAAATTGTTTCTAAAATTCTAGCAAATAGGATGAAAACTTATCTGAATGATTTTATTAGCCCCTTTCAATCTGCCTTTATACCTGGGAGATTTATCACAGATAACTCTATAATGATTAATGAAGTTCTTCACAGTATGGCAAGGAGTTGTTCTAAGGAGGGTTTGATGGCTGTAAAGGTCGATATGGCTAAAGCATATGACAGAATTGAATGGAGTTTTCTGTTGAATGTGATGAAGGCCTTGGGGTTTTCTGATAGGTTTGTGCATTTGGTGAACCAGTGTATATCTACTTCCTCTTATTCTATTTTACTCAATGGCAGACCACACGGGCACTATAGACCTGAGAGAGGACTAAGACAGGGGGACTCTTTGTCTCCATTCTTATTTGTCATTGCTATTGACGCTTTTTCCAGGTTGATCATAAAGAAGCAAGAGGAGGGACTTATCCAAGGAATCAAAATTGCAAGAGACTGTCCTCCTATTACTCATCTTTTATATGCTGATGACCTGGTCATCTTTTGTAGAGCCAATGAGCAGAATGCAAAGGAGGTGAAAGATGCTCTGGATATTCTGCAAGAATGGAGTGGTCTGATGGCTAACAACTTGAAGTCAGGGATTTATTTTAGCAAAAAGACTAAAAGGGAGAATATGGTGGCTGTTAAACGGGTGTTACAATTTAGGGAAATGGAAAAGGAGGCTGTGTACCTAGGGCTCCCATTTTTCAGAAAGCAAAGCAAATACAAGAGGTTTGTATATTTGAAAGACAGACTACAAGCTAATTTGCAAGGATGGAAGGCCAAAAATCTTTCTTATGCAGCTAGAGCTACTCTCATACAGTCTGTGGGATCTACCATTCCGGTGTACTCTATGGCCAGTAATATGATCACTAAGAAAATGTGTAAGGAGTTGGATAGTCTTATGAGAGACTTTTGGTGGGGATTTAAAGAAGATAAGAAGGGATTATACTTCAAGGCGTGGAAACAAATTTGCAGACCAGTGGAGGAAGGAGGGTTAAACCTCAGATTAATGCATGACTATAACAGGGCTATACAAGCTAAGCTGTTCTGGCAATTGGCGAGTAAGGAAGATAAACTTTGGGTGAAACAATGCTGGACTAAATATTGCAGAAGACATAACCCTTTCTTTGTGGAAATTGAAGAGCAGGATTCTCCACAATGGAAGGAGATCTTGCAAGGCAAAGCATTGATCCAGAAGGGATTCTGCATCATGGTGGGAGATGGGAGGTCAGTCAATATTTGGACCGACCCGTGGGTTCCTTACATCCAGGGGTTTAAACCCATCCCAAGAGAAGATTCAGAAATTGAGGTTTTTACAGTGGATGAACTGATTGAAAACGGTGTATGGAAGAAGGACCTTATAATGGAGGTATTTGAGAACAACTCAGCAGAAGCAATACTCAATATAAGTTTGCCACAATTAGAAATTTCGGATACCGTAATCTGGACAAAGGAAAGGCATGGTAGTTTCACAGTGAGGAGTGGATATAAGGAGGTATTGAAGGAAAAGAACTTGGAGCCCTCGGTCTTGGAATCAAAACTGTGGAAATTGATTTGGAAAATAAAAGTTCCTCAAAGGATGAAAATGATGTTTTGTAGGGCAGTGGCTGGGTGCATACCCCTTAAAGCCGAAATTAAACTCAAAATACAAGAGGCTGAGGACCTTTGCACCTTTTGTAAAGAGATCTCTGAAGATTTTGTGCATCTATTTTTCAATTGCCAGTATTCAAGAATGGTGTGGTTCAATTGCTTGGGTATTAGAGTTGATGGGATGGCTCAGTGGGACAAGGTACAGTGGGTGAAAGCTATTCTACAACCAGAAAAACACTTGCATATTCCTAAGGGTATAGGTGAAGACTTTGTTGCAAAAGCCGTCATCTTGATGGAATGTATTTGGAGAGAAAGAAATGTATGCTATCATGAGAACAGAGGACCTGATCCCAATCTTATTTGCCAACAATTTAATAGAGGATGGATGGAAATCAGTCCTTTGAGGAGAGAGACCAAGAGCCAAAAGATACTAAATTCTACCCAATTCTCCCCCGAGGGTATGAATATTTATTGTGTGGATGCTGCAGTTAGGGACAATGGATCTACTGGTGCTTGGGTAAAGATGGATCAGGAGATGAATCCTAGGGAGGCTGGGGCTTTAAAGGTTAGAGCTACCAAGGCTGAGCAAGTTGAAGCTGAAGCTATCAGGGGTGTTCTAAGGCACATTAAGGGCATTGGCAAGGAGAATTGCAGGGTTTACTGTGATGCAAAGGTGGTGGTGGAACAAGTCAATGGAAGGCAAAAGCTCAATTGGGAAATCAAGTCTGTTATTATGGAAATTGCAAACCTGTGTAGGGAGATTAATGGTATGGTTATGTATATACCTAGAGATTGTAATTGGTCTGCCCACAACATGGCAGCATGGGCCAGTTTGAGGAGGTTTGAAGGCATTTTACGTAGCTCGGAACTCCCTCTAACAGTCCAATGCAGAAATGTATTTTGTCCACAATACAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_140593.p1 GENE.R_Transcript_140593~~R_Transcript_140593.p1 ORF type:complete len:1362 (+),score=235.39,RVT_1|PF00078.23|2.6e-44,zf-RVT|PF13966.2|2.8e-14,Exo_endo_phos|PF03372.19|2.4e-11,RVT_3|PF13456.2|1.5e+03,RVT_3|PF13456.2|3.1e-10,Exo_endo_phos_2|PF14529.2|1.9e-06 R_Transcript_140593:458-4543(+)
MLAISWNCQGIGHPETVLHLKALIKKYKPTVVFLAETMLMEDKAVDNLRHLGFDNLFASSAAGKSGGLVVMWNNYCGSELVLTTDQLYLIRFKDGVRDLVWYLCCVYRAPNHGDKEAFWEALDSLISFINNPICIIGDFNDILDSGEKWGGRLGSSSNSGGLRRIVNKHGLFDLGYQGNPFTWFRRRGGRVVLKERLDRAIWNSSWRDLFHNANVTHTPAIKSDHSPIILNCLGVQDRGPTPFRFEAMWVREDSCYHAVEEAWQEDILGSYGFRLKHKLKVTKRKLREWNLNTFGNVQQRIRCLVQQIDDIQQNNNSSISSSGLEESLMAELAELYTREAIMHKQKSRIAYLKEGDQNTRFFHLSTVNRRRRNAVEALKLTNGIWVDSEQDIAIAFSDYFKELFSSSNPPEADLTGLYEPIISEQDNISLCVAPDAEEIMQTVNSMGATKSPGPDGFPALFYQQYWPIVKDDLVKMVQAFFHSGFLLRELNHTFITLVPKSDQAMKVTDFRPISLCNVAYKIVSKILANRMKTYLNDFISPFQSAFIPGRFITDNSIMINEVLHSMARSCSKEGLMAVKVDMAKAYDRIEWSFLLNVMKALGFSDRFVHLVNQCISTSSYSILLNGRPHGHYRPERGLRQGDSLSPFLFVIAIDAFSRLIIKKQEEGLIQGIKIARDCPPITHLLYADDLVIFCRANEQNAKEVKDALDILQEWSGLMANNLKSGIYFSKKTKRENMVAVKRVLQFREMEKEAVYLGLPFFRKQSKYKRFVYLKDRLQANLQGWKAKNLSYAARATLIQSVGSTIPVYSMASNMITKKMCKELDSLMRDFWWGFKEDKKGLYFKAWKQICRPVEEGGLNLRLMHDYNRAIQAKLFWQLASKEDKLWVKQCWTKYCRRHNPFFVEIEEQDSPQWKEILQGKALIQKGFCIMVGDGRSVNIWTDPWVPYIQGFKPIPREDSEIEVFTVDELIENGVWKKDLIMEVFENNSAEAILNISLPQLEISDTVIWTKERHGSFTVRSGYKEVLKEKNLEPSVLESKLWKLIWKIKVPQRMKMMFCRAVAGCIPLKAEIKLKIQEAEDLCTFCKEISEDFVHLFFNCQYSRMVWFNCLGIRVDGMAQWDKVQWVKAILQPEKHLHIPKGIGEDFVAKAVILMECIWRERNVCYHENRGPDPNLICQQFNRGWMEISPLRRETKSQKILNSTQFSPEGMNIYCVDAAVRDNGSTGAWVKMDQEMNPREAGALKVRATKAEQVEAEAIRGVLRHIKGIGKENCRVYCDAKVVVEQVNGRQKLNWEIKSVIMEIANLCREINGMVMYIPRDCNWSAHNMAAWASLRRFEGILRSSELPLTVQCRNVFCPQYN*

Click here to download the sequence:
Link to NCBI Protein BLAST